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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4pf1D_

Fold library idPDB HeaderMoleculeTitle
c4pf1D_PDB header: hydrolaseChain: D: PDB Molecule: peptidase s15/coce/nond;PDBTitle: crystal structure of aminopeptidase from marine sediment archaeon2 thaumarchaeota archaeon


Added to library: Sat Jun 14 08:25:43 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence FSEDSDSDIPEKFTPKTDLFDYTRREEMIPMRDGVKLNTIILIPKGVQNTPIVLTRTPYHAERRTLRFNS
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Known secondary structure (DSSP)

TTTS
SS
SS




TTSS
TTS
SS

SSS
T
SS

 .........80.........90.........100.........110.........120.........130.........140
Sequence SSLSMVVPQMNDTTSAARYIIVYQDVRGKYGSEGGYMMNKPLTGPLNTTGTDHSTDTYDTIDWLVKNIPE
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Known secondary structure (DSSP) SSS
GGGTT

TTSTT

S


TT


SBTTB
SS


TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence SNGRVAAIGGSYEGYTTLMCTINPHPALKAVVPFASMVDGWMGDDWFHMGAFRQEASLPYAYNQEATRKN
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Known secondary structure (DSSP) TTTSS

TTS



TTTTSSSTT
SSSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence EIKWWSGSYDTYDAYLRAGNAGAMAASRGMESIGFWKKLAAHPSYDSFWQQQAMDKMLAQHPLTVPMLIV
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Known secondary structure (DSSP)
S



S
S

STTGGG


SS
TT
TS


S
 .........290.........300.........310.........320.........330.........340.........350
Sequence GGLFDQEDIYGSPKLYKVLAPKDPEGKLVHFVLGPWNHGQGRRDARSLGPLQFEGDTGGWFRRNVMQPFL
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Known secondary structure (DSSP) TT
SS
TTTTT
TT
SSS

TTGGGS

STT
SS
T
 .........360.........370.........380.........390.........400.........410.........420
Sequence DHYLKDAPKLDIPRVLSYETGANAWHRYDDWPPEEAHYCDLYVQEDGKLGFEMPAAKQAFDEYVSDPAKP
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Known secondary structure (DSSP)







SBTTTSSSS



STTBS




SS

TTS
 .........430.........440.........450.........460.........470.........480.........490
Sequence VPYRQRPTIPSYAAESTWGEWLVDDQRHTASRTDVLVWATEPLKEPLRVAGQPVARLFASTSGSDADWVV
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Known secondary structure (DSSP)
BSSSSS


TTSTT

GGGGGG
B
T
TTS



SS
SSS

 .........500.........510.........520.........530.........540.........550.........560
Sequence KIIDVWPDEVPENPKLGGYQQMLSADIFRGRYREDFAVAKPLVPDKVLEYRIPLPQVSHTFLPGHRIMVQ
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Known secondary structure (DSSP)

SS
SS
GGGTT
GGGSS
TTS




TT





TT
 .........570.........580.........590.........600.........610.
Sequence VQSSWFPLYDRNPQTFVPNIMFAPPESYRKATQRVWRTAEYPTAIEIHIIS
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Known secondary structure (DSSP) S

BTTS



SS

S
GGG

GGG


BSSSSB


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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