Fold library entry viewer: c4pdxB_

Added to library: Sat May 2 08:17:28 2015
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	E	E	A	K	A	A	T	Q	Y	T	Q	Q	V	N	Q	N	Y	A	K	S	L	P	F	S	D	R	Q	D	F	D	D	A	Q	R	G	F	I	A	P	L	L	D	E	G	I	L	R	G	K	V	Y	Y	R	A	D	D	Y	K	F	D	I	N	A	A	A	P	E	T	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																						S		T	T										T	T						G	G	G	G										G	G	G	G				T	T	S				T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	P	S	L	W	R	Q	S	Q	I	N	G	I	S	G	L	F	K	V	T	D	K	X	Y	Q	V	R	G	Q	D	I	S	N	I	T	F	V	E	G	E	K	G	I	I	V	I	D	P	L	V	T	P	P	A	A	K	A	A	L	D	L	Y	F	Q	H	R	P	Q	K	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T									T	T						S	S	S	S	S								S	S	S								S	S													T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	V	A	V	I	Y	T	H	S	H	T	D	H	Y	G	G	V	K	G	I	I	S	E	A	D	V	K	S	G	K	V	Q	V	I	A	P	A	G	F	X	D	E	A	I	S	E	N	V	L	A	G	N	I	X	S	R	R	A	L	Y	S	Y	G	L	L	L	P	H	N	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								B	S	S	G	G	G	T	T	T	G	G	G	T								T	T	S	S						T	T								T	T	T	T	T												T	T	T	T	S		S	S	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	Q	G	N	V	G	N	G	L	G	V	T	L	A	T	G	D	P	S	I	I	A	P	T	K	T	I	V	R	T	G	E	K	X	I	I	D	G	L	E	F	D	F	L	X	T	P	A	E	X	H	F	Y	I	P	A	L	K	A	L	C	T	A	E	N	A	T	H	T	L	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S					S	S	S	S					S								S					S	T	T						T	T											B						G	G	G	T					T	T	S	S		S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	N	F	Y	T	L	R	G	A	K	T	R	D	T	S	K	W	T	E	Y	L	N	E	T	L	D	X	W	G	N	D	A	E	V	L	F	X	P	H	T	W	P	V	W	G	N	K	H	I	N	D	Y	I	G	K	Y	R	D	T	I	K	Y	I	H	D	Q	T	L	H	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S		T	T																						T	T	T							S	S	S					S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	N	Q	G	Y	T	X	N	E	I	G	D	X	I	K	L	P	P	A	L	A	N	N	W	A	S	R	G	Y	Y	G	S	V	S	H	N	A	R	A	V	Y	N	F	Y	L	G	Y	Y	D	G	N	P	A	N	L	H	P	Y	G	Q	V	E	X	G	K	R	Y	V	Q	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T																		T		G	G	G	S		S	S	S																S			S		G	G	G	T	S															T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	G	G	S	A	R	V	I	N	L	A	Q	E	A	N	K	Q	G	D	Y	R	W	S	A	E	L	L	K	Q	V	I	A	A	N	P	G	D	Q	V	A	K	N	L	Q	A	N	N	F	E	Q	L	G	Y	Q	A	E	S	A	T	W	R	G	F	Y	L	T	G	A	K	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T															T	T																	T	T																				S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	R	E	G	V	H	K	F	D	T	I	R	G	X	S	V	E	X	L	F	D	F	X	A	V	R	L	D	S	A	K	A	A	G	K	N	I	S	L	N	F	N	X	S	N	G	D	N	L	N	L	T	L	N	D	S	V	L	N	Y	R	K	T	L	Q	P	Q	A	D	A	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	T	T	S													B						T	T										S	T	T									T	T						S	S			T	T		S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.
Sequence	F	Y	I	S	R	E	D	L	H	A	V	L	T	G	Q	A	K	X	A	D	L	V	K	A	K	K	A	K	I	I	G	N	G	A	K	L	E	E	I	I	A	C	L	D	N	F	D	L	W	V	N	I	V	T	P	N	L	E	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T	S	S								T	T	S							T								T	T	B					T	T			S	S	S

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PDB structure

FASTA sequence

Hidden Markov model

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