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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4pdpB_

Fold library idPDB HeaderMoleculeTitle
c4pdpB_PDB header: transferaseChain: B: PDB Molecule: serine/threonine-protein kinase rad53;PDBTitle: crystal structure of rad53 kinase domain and scd2


Added to library: Sat May 31 09:44:26 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TGIFKDFSIIDEVVGQATVKKAIERTTGKTFSVKIISKDGVTRELEVLQKLNHPRIVRLKGFYEDSYYMV
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Known secondary structure (DSSP)

GGGTS

S


TTT






TS


TTB



 .........80.........90.........100.........110.........120.........130.........140
Sequence MEFVSGGDLMDFVAAHGAVGEDAGREISRQILTAIKYIHSMGISHRDLKPDNILIEQDDPVLVKITAFGL
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Known secondary structure (DSSP)


TT
B
S

TT
S


GGGTT


TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence AKVQTLAYVAPEVINEYSSLVDMWSMGCLVYVILTGHLPFSGSTQDQLYKQIGRGSYHEGPLKDFRISEE
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Known secondary structure (DSSP)


GGG

TTT

TTSS
SS

SST



T

 .........220.........230.........240.........250.........260.....
Sequence ARDFIDSLLQVDPNNRSTAAKALNHPWIKMSPLSYGDFSQISLSQSLSQQKLLEN
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Known secondary structure (DSSP)

SSGGG


TT
TTTT





S
TT


TTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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