Fold library entry viewer: c4pd3B_

Added to library: Sat Nov 15 08:47:44 2014
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	P	E	R	Y	L	F	V	D	R	A	V	K	K	L	V	W	I	P	S	E	R	H	G	F	E	A	A	S	I	K	E	E	R	G	D	E	V	M	V	E	L	A	E	N	G	N	K	D	D	I	Q	K	M	N	P	P	K	F	S	K	V	E	D	M	A	E	L	T	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S		S	S		S	T	T											S	S	S	S											T	T								S					T	T							G	G	G	T	T		S	B	G	G	G		S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	N	E	A	S	V	L	H	N	L	K	D	R	Y	Y	S	G	L	I	Y	T	Y	S	G	L	F	C	V	V	I	N	P	Y	K	N	L	P	I	Y	S	E	N	I	I	E	M	Y	R	G	K	K	R	H	E	M	P	P	H	I	Y	A	I	S	E	S	A	Y	R	C	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S													T	T	T							T	T								S	S			S										S	T	T			S	T	T	S		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	Q	D	R	E	D	Q	S	I	L	C	T	G	E	S	G	A	G	K	T	E	N	T	K	K	V	I	Q	Y	L	A	H	V	A	S	S	L	E	R	Q	L	L	Q	A	N	P	I	L	E	S	F	G	N	A	K	T	V	K	N	D	N	S	S	R	F	G	K	F	I	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S		S										G	G	G	T																S					T	T	T	S	S	S													S	S		S	S				S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	I	N	F	D	V	T	G	Y	I	V	G	A	N	I	E	T	Y	L	L	E	K	S	R	A	V	R	Q	A	K	D	E	R	T	F	H	I	F	Y	Q	L	L	S	G	A	G	E	H	L	K	S	D	L	L	L	E	G	F	N	N	Y	R	F	L	S	N	G	Y	I	P	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	S																						T	T				B																			T				G	G	G		T	T	S	T	T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	P	G	Q	Q	D	K	D	N	F	Q	E	T	M	E	A	M	H	I	M	G	F	S	H	E	E	I	L	S	M	L	K	V	V	S	S	V	L	Q	F	G	N	I	S	F	K	K	E	R	N	T	D	Q	A	S	M	P	E	N	T	V	A	Q	K	L	C	H	L	L	G	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S																	T	T																					T							S	S	S	S																	S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	N	V	M	E	F	T	R	A	I	L	T	P	R	I	K	Y	V	Q	K	A	Q	T	K	E	Q	A	D	F	A	V	E	A	L	A	K	A	T	Y	E	R	L	F	R	W	L	V	H	R	I	N	K	A	L	G	A	S	F	I	G	I	L	D	I	A	G	F	E	I	F	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S																																								T	T																		S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	L	N	S	F	E	Q	L	C	I	N	Y	T	N	E	K	L	Q	Q	L	F	N	H	T	M	F	I	L	E	Q	E	E	Y	Q	R	E	G	I	E	W	N	F	I	D	F	G	L	D	L	Q	P	C	I	D	L	I	E	R	P	A	N	P	P	G	V	L	A	L	L	D	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	B																																	T	T								G	G	G	G	S								S			S	S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	E	C	W	F	P	K	A	T	D	K	T	F	V	E	K	L	V	Q	E	Q	G	S	H	S	K	F	Q	K	P	K	A	D	F	C	I	I	H	Y	A	G	K	V	D	Y	K	A	D	E	W	L	M	K	N	M	D	P	L	N	D	N	V	A	T	L	L	H	Q	S	S	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S	T	T															S	S		T	T							S						S	S								T	T					T														S		S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	R	F	V	A	E	L	W	K	D	V	D	R	M	F	R	T	V	G	Q	L	Y	K	E	S	L	T	K	L	M	A	T	L	R	N	T	N	P	N	F	V	R	C	I	I	P	N	H	E	K	R	A	G	K	L	D	P	H	L	V	L	D	Q	L	R	C	N	G	V	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	S																									T	T	S												T	T			T	T															T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	G	I	R	I	C	R	Q	G	F	P	N	R	I	V	F	Q	E	F	R	Q	R	Y	E	I	L	T	P	N	A	I	P	K	G	F	M	D	G	K	Q	A	C	E	R	M	I	R	A	L	E	L	D	P	N	L	Y	R	I	G	Q	S	K	I	F	F	R	A	G	V	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S															G	G	G	S	T	T	T	S		S	S		S													S				T	T	S					S	S						T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	H	L	E	E	E	R	A	S	E	Q	T	K	S	D	Y	L	K	R	A	N	E	L	V	Q	W	I	N	D	K	Q	A	S	L	E	S	R	D	F	G	D	S	I	E	S	V	Q	S	F	M	N	A	H	K	E	Y	K	K	T	E	K	P	P	K	G	Q	E	V	S	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																		T						S	S																T	T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	E	A	I	Y	N	S	L	Q	T	K	L	R	L	I	K	R	E	P	F	V	A	P	A	G	L	T	P	N	E	I	D	S	T	W	S	A	L	E	K	A	E	Q	E	H	A	E	A	L	R	I	E	L	K	R	Q	K	K	I	A	V	L	L	Q	K	Y	N	R	I	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T	S	S	S						T	T	S		S																																												T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	K	L	E	N	W	A	T	T	I	T	A	V	Q	A	K	L	K	N	L	E	A	F	D	G	E	C	Q	S	L	E	G	Q	S	N	S	D	L	L	S	I	L	A	Q	L	T	E	L	N	Y	N	G	V	P	E	L	T	E	R	K	D	T	F	F	A	Q	Q	W	T	G	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T							T	T																													T	T		S	S		S
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930
Sequence	K	S	S	A	E	T	Y	K	N	T	L	L	A	E	L	E	R	L	Q	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)

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PDB structure

FASTA sequence

Hidden Markov model

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