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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4pbqC_

Fold library idPDB HeaderMoleculeTitle
c4pbqC_PDB header: solute-binding proteinChain: C: PDB Molecule: putative trap periplasmic solute binding protein;PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 haemophilus influenzae rdaw (hicg_00826, target efi-510123) with3 bound l-gulonate


Added to library: Sat May 10 08:19:06 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KTIIKLGHYNSDIHPSHIALQEYFKKTIENETNHKYEIRLYPNNQLGGEDQIVNGLRNGTIEAGITGLLL
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Known secondary structure (DSSP)

SS
TTSTTTTS
TTTT

TSS

SGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence QNVDPIFGVWEWPYLFKDNQEAKKVLESPIANKIGQKXEKYGIKLLAYGXNGFRVISSNKKLEKFDDFKG
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Known secondary structure (DSSP) GGT
GGGGGGGSTT

SSTSGGGGTSS


SGGGGTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence LRLRVPLNSLFVDWAKAXNINPQSXPLSEVFTALEQKVIDGQENPYXLIKDSGLYEVQKYIIQSNHIFSP
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Known secondary structure (DSSP)

S
TT


GGGTTS
STTGGGG
S




 .........220.........230.........240.........250.........260.........270.........280
Sequence GLLQISLKTWNKIPKEDQIIFEKAAKLYQEKEWELAIKTELEVKDYLAKHGNEIIVPSEAFKNDXVNASK
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Known secondary structure (DSSP) TTS
SS



 .........290.........300....
Sequence VLYDSFYKKYDWAKDVVQKINEAK
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Known secondary structure (DSSP)
TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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