Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4pboA_

Fold library idPDB HeaderMoleculeTitle
c4pboA_PDB header: immune systemChain: A: PDB Molecule: c-reactive protein;PDBTitle: crystal structure of zebrafish short-chain pentraxin protein without2 calcium ions


Added to library: Sat Mar 28 08:16:55 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence FKNLSGKVLQFKTATDNSYVKLYPEKPLSLSAFTLCMRVATELPLDREVILFAYYTPDVDELNVWRERDG
Predicted secondary structure





































SS confidence





































































Known secondary structure (DSSP)

S
TT
S

SS

SS


BS

S
TTS
TT
TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence RVSLYIQSSKDAAFFRLPPLSTLQTHLCVAWESATGLTAFWMDGRRSLHQVYRKGYSIRSGGTVVLGQDP
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP)
S
SS






SS
TTT
TT



STT

B
SS
SS
G
 .........150.........160.........170.........180.........190.........200.......
Sequence DSYVGSFDVDQSFVGEIANLQMWDYVLSSAQIKAVYYNQDNRVKGNVFDWDTIEYDVTGNVLVVPDN
Predicted secondary structure































SS confidence


































































Known secondary structure (DSSP) GG
SSS

GGG


SS


TT
TT



SSTTT
SS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D