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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4p8bA_

Fold library idPDB HeaderMoleculeTitle
c4p8bA_PDB header: transport proteinChain: A: PDB Molecule: trap-type transporter, periplasmic component;PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 ralstonia eutropha h16 (h16_a1328), target efi-510189, with bound3 (s)-2-hydroxy-2-methyl-3-oxobutanoate ((s)-2-acetolactate)


Added to library: Sat May 10 08:20:47 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence YKSEYKXSLVLGPAFPWGKGGEIWADLVKQRTNGRINIKLYPGTSLVAGDQTREFSAIRQGVIDXAVGST
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Known secondary structure (DSSP)

S

SS
TTSTTT
S
GGGGGGTT
GGGTSSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence INWSPQVRELNLFSLPFLXPDYKALDALTQGEVGKSIFATLEKAGVVPLAWGENGFREVSNSKREIRKPE
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Known secondary structure (DSSP) TTT
GGGGGGGSTT


STSTT
SS



SGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence DLKGXKLRVVGSPLYIETFNALGANPTQXSWADAQPAXASGAVDGQENPQSVFAAAKLYTVGQKFVTTWG
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Known secondary structure (DSSP) GGTT

S
TT


TSSS
TTGGGGT




 .........220.........230.........240.........250.........260.........270.........280
Sequence YVADPLIFVVNKQIWESWTPADREIVKQAAVDAGKQEIALARKGLAEPGAPAWKDXEAHGVKVTHLTPAE
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Known secondary structure (DSSP)

S
TTTTSSTT
TTT



 .........290.........300.........310....
Sequence HDAFRKATAKVYDKWKKQIGTDLVTKAEGAIAKR
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Known secondary structure (DSSP) T
T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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