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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4p7hB_

Fold library idPDB HeaderMoleculeTitle
c4p7hB_PDB header: motor/fluorescent proteinChain: B: PDB Molecule: myosin-7,green fluorescent protein;PDBTitle: structure of human beta-cardiac myosin motor domain::gfp chimera


Added to library: Sat May 24 08:46:48 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DSEMAVFGAAAPYLRKSEKERLEAQTRPFDLKKDVFVPDDKQEFVKAKIVSREGGKVTAETEYGKTVTVK
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Known secondary structure (DSSP)
GGGGGSGGGGGGT


T
S

TTT
SSSSTTSSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence EDQVMQQNPPKFDKIEDMAMLTFLHEPAVLYNLKDRYGSWMIYTYSGLFCVTVNPYKWLPVYTPEVVAAY
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Known secondary structure (DSSP) TTT



GGGTT
SBGGG
S

STT


TT


S

TTSSTTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence RGKKRSEAPPHIFSISDNAYQYMLTDRENQSILITGESGAGKTVNTKRVIQYFAVIAAIGDPGKGTLEDQ
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Known secondary structure (DSSP) SS

STTS


T


STTSS

B



SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence IIQANPALEAFGNAKTVRNDNSSRFGKFIRIHFGATGKLASADIETYLLEKSRVIFQLKAERDYHIFYQI
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Known secondary structure (DSSP) T

SS
TT
S
SS




T


SS


B
 .........290.........300.........310.........320.........330.........340.........350
Sequence LSNKKPELLDMLLITNNPYDYAFISQGETTVASIDDAEELMATDNAFDVLGFTSEEKNSMYKLTGAIMHF
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Known secondary structure (DSSP) SSSSST

S
GGG
SS



SS

TT

 .........360.........370.........380.........390.........400.........410.........420
Sequence GNMKFKLKQEQAEPDGTEEADKSAYLMGLNSADLLKGLCHPRVTKGQNVQQVIYATGALAKAVYERMFNW
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Known secondary structure (DSSP) TS







S
STTT

SS







 .........430.........440.........450.........460.........470.........480.........490
Sequence MVTRINATLETKQPRQYFIGVLDIAGFEIFDFNSFEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEW
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Known secondary structure (DSSP)


S









SSB
S



 .........500.........510.........520.........530.........540.........550.........560
Sequence TFIDFGMDLQACIDLIEKPMGIMSILEEECMFPKATDMTFKAKLFDNHLGKSANFQKPRNIKGKPEAHFS
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Known secondary structure (DSSP)



GGGGTTSTTS
SS

TBTTBTT




SSS


S
 .........570.........580.........590.........600.........610.........620.........630
Sequence LIHYAGIVDYNIIGWLQKNKDPLNETVVGLYQKSSLKLLSTLFANYQTVSALHRENLNKLMTNLRSTHPH
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Known secondary structure (DSSP)
SS


TTTT



T
SSTTS



TT
 .........640.........650.........660.........670.........680.........690.........700
Sequence FVRCIIPNETKSPGVMDNPLVMHQLRCNGVLEGIRICRKGFPNRILYGSRKGAEKLLSSLDIDHNQYKFG
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Known secondary structure (DSSP)


SS

SS


TTSSSS

S


S
S
SSS
 .........710.........720.........730.........740.........750.........760.........770
Sequence HTKVFFKAGLLGLLEEMRDERLSRIITRTQAAEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKL
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Known secondary structure (DSSP) SS
TTTSSTTTTTT
 .........780.........790.........800.........810.........820.........830.........840
Sequence TLKFICTTGKLPVPWPTLVTTFVQCFSRYPDHMKRHDFFKSAMPEGYVQERTIFFNDDGNYKTRAEVKFE
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Known secondary structure (DSSP) SSSS
SS
GGGSTTT

GGGSB

GGGGGG
TTT
TTS
 .........850.........860.........870.........880.........890.........900.........910
Sequence GDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKNGIKANFKTRHNIEDGGVQLADHYQQN
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Known secondary structure (DSSP) TT
BBS

SSSSTTTT
B
S



SSSS

BSS


 .........920.........930.........940.........950..
Sequence TPIGNGPVLLPDNHYLSTQSALSKDPNEKRDHMVLLEFVTAA
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Known secondary structure (DSSP) SS









TT

S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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