PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4p6vE_

Fold library id	PDB Header	Molecule	Title
c4p6vE_	PDB header: oxidoreductase	Chain: E: PDB Molecule: na(+)-translocating nadh-quinone reductase subunit e;	PDBTitle: crystal structure of the na+-translocating nadh: ubiquinone2 oxidoreductase from vibrio cholerae

Links to external resources
Added to library: Sat Dec 6 08:16:41 2014

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence Y I S L L V K S I F I E N M A L S F F L G M C T F L A V S K K V K T S F G L G I A V I V V L T I S V P V N N L V Y N L V L K P D A L V E F L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T B T T B S
T S
S
S T T S S S
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence N F I T F I G V I A A L V Q I L E M I L D R F F P P L Y N A L G I F L P L I T V N C A I F G G V S F M V Q R D Y S F A E S V V Y G F G S G V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T S S G G G T T
T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . .

Sequence G W M L A I V A L A G I R E K M K Y S D V P P G L R G L G I T F I T A G L M A L G F M S F S G V Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
S T T
T T G G G S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Y	I	S	L	L	V	K	S	I	F	I	E	N	M	A	L	S	F	F	L	G	M	C	T	F	L	A	V	S	K	K	V	K	T	S	F	G	L	G	I	A	V	I	V	V	L	T	I	S	V	P	V	N	N	L	V	Y	N	L	V	L	K	P	D	A	L	V	E	F	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T	T	B	T	T	B	S				T					S		S																															S	T	T	S	S	S				T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	F	I	T	F	I	G	V	I	A	A	L	V	Q	I	L	E	M	I	L	D	R	F	F	P	P	L	Y	N	A	L	G	I	F	L	P	L	I	T	V	N	C	A	I	F	G	G	V	S	F	M	V	Q	R	D	Y	S	F	A	E	S	V	V	Y	G	F	G	S	G	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																							S									T	T	S	S	G	G	G	T	T															T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Sequence	G	W	M	L	A	I	V	A	L	A	G	I	R	E	K	M	K	Y	S	D	V	P	P	G	L	R	G	L	G	I	T	F	I	T	A	G	L	M	A	L	G	F	M	S	F	S	G	V	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		T	S				S	T	T																	T	T	G	G	G	S