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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4p6qA_

Fold library idPDB HeaderMoleculeTitle
c4p6qA_PDB header: transcriptionChain: A: PDB Molecule: msx2-interacting protein;PDBTitle: the crystal structure of the split end protein sharp adds a new layer2 of complexity to proteins containing rna recognition motifs


Added to library: Sat May 17 09:10:35 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence FGIKVQNLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGTSEERYGLVFFRQQEDQEKALTASKGKLFFGM
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Known secondary structure (DSSP)



TTS
GGGS


TTT
SSTTT
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence QIEVTAWIGPETESENEFRPLDERIDEFHPKATRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNG
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Known secondary structure (DSSP)



S


TT
STTSTT

SS

TT

TTSS
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence VPQYAFLQYCDIASVCKAIKKMDGEYLGNNRLKLGFGKSMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVV
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Known secondary structure (DSSP) SSTT
TT






S


TT

GGGS
 .........220.........230.........240.........250.........260.........270.........280
Sequence KVVFDRLKGMALVLYNEIEYAQAAVKETKGRKIGGNKIKVDFANRESQLAFYHCMEKSGQDIRDFYEMLA
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Known secondary structure (DSSP) TTTTS
TTSTT


TT




 ......
Sequence ERREER
Predicted secondary structure

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Known secondary structure (DSSP) T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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