PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4p6dA_

Fold library id	PDB Header	Molecule	Title
c4p6dA_	PDB header: lyase	Chain: A: PDB Molecule: 3,4-dihydroxy-2-butanone 4-phosphate synthase;	PDBTitle: structure of ribb complexed with po4 ion

Links to external resources
Added to library: Sat Mar 28 08:15:28 2015

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S L L A E F G D P I T R V E N A L Q A L R E G R G V L L L D D E D R E N E G D I I Y A V E S L T T A Q M A L M I R E C S G I V C L C L T E A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T G G G
T T
S S S
T T
B
S T T
B
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Q A D R L A L P P T V S I E A K H G V T T G V S A Q D R V T T I K T A A N P Q A K P E D L A R P G H V F P L R A R A G G V L A R R G H T E G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S S
S S S
S
T T
G G G
T T G G G T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 .

Sequence T V D L M Q M A G L Q P A G V L C E L T N P D G S M A K T P E I I E F G K L H N M P V L T I E D M V Q Y R I Q F D L K L A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
S
B B
T T S S B
B T
T S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	L	L	A	E	F	G	D	P	I	T	R	V	E	N	A	L	Q	A	L	R	E	G	R	G	V	L	L	L	D	D	E	D	R	E	N	E	G	D	I	I	Y	A	V	E	S	L	T	T	A	Q	M	A	L	M	I	R	E	C	S	G	I	V	C	L	C	L	T	E	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	G	G	G																T	T							S	S	S		T	T		B							S	T	T													B		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	A	D	R	L	A	L	P	P	T	V	S	I	E	A	K	H	G	V	T	T	G	V	S	A	Q	D	R	V	T	T	I	K	T	A	A	N	P	Q	A	K	P	E	D	L	A	R	P	G	H	V	F	P	L	R	A	R	A	G	G	V	L	A	R	R	G	H	T	E	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T										S	S	S		S	S	S		S														T	T			G	G	G														T	T	G	G	G	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Sequence	T	V	D	L	M	Q	M	A	G	L	Q	P	A	G	V	L	C	E	L	T	N	P	D	G	S	M	A	K	T	P	E	I	I	E	F	G	K	L	H	N	M	P	V	L	T	I	E	D	M	V	Q	Y	R	I	Q	F	D	L	K	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	S		S							B	B		T	T	S	S	B		B												T																	T	S