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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4p6bB_

Fold library idPDB HeaderMoleculeTitle
c4p6bB_PDB header: hydrolaseChain: B: PDB Molecule: est-y29;PDBTitle: crystal structure of est-y29,a novel penicillin-binding protein/beta-2 lactamase homolog from a metagenomic library


Added to library: Sat Sep 13 09:08:59 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DLLTNVAENYVNQDLFAGIEWRIDQDGKPIFQGCAGVKDIETRTFIPKNAIYRIYSMTKPIVSFLAMMLI
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Known secondary structure (DSSP)
TTS
STTTTTT

TT

GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence ERGVFRLSSPIQNFDPRFKSMKVIDQHAHIEPATALITIEHLLTHQAGFSYDFSLGCPISAHYRDAQLIE
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Known secondary structure (DSSP) TTS

TT
BGGGT
GGGSS

TTS

SS

BT
SS


TT
TT
SSTTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence DGGRDLTDMMGVLAELPLVFHPGTQWKYSISTDVLAHIIECATGERVDDLLQRLIFDPLDMQDTGFSLPL
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Known secondary structure (DSSP)
TTS
TS
BSS
TTS




TSS
TTTTTT
TT
BSS

T
 .........220.........230.........240.........250.........260.........270.........280
Sequence DGASRLMEVYGMRGLPALKPAPHVLVPADLGSSHPTDDPDFRRGGHGLYSTLDDYMAFANMLLSGQTPEG
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Known secondary structure (DSSP) T
GGGB


B






SS






B


TTSS
SS
TT


SSS

TTTTB
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence ETLLSPAVLKLALAPRVHFGARGMRINDEPFAGYSWNLLGRVMTDVGAAAYATHLGEFGWSGAAATYFWV
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Known secondary structure (DSSP)
BSS
S

B


TT
TTTT
SSS

GGG
SSS

TT

B
TTS
 .........360.........370.........380...
Sequence DPTKNMTGCVMTQFLGSQHPIGSDMQAAAMSML
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Known secondary structure (DSSP) GGGT

BTT
SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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