PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4p5wA_

Fold library id	PDB Header	Molecule	Title
c4p5wA_	PDB header: transport protein	Chain: A: PDB Molecule: calcium-binding mitochondrial carrier protein aralar2,	PDBTitle: structure of the n- and c-terminal domain fusion of the human2 mitochondrial aspartate/glutamate carrier citrin in the calcium-bound3 state

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Added to library: Sat Nov 29 08:21:49 2014

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence T K R A D P A E L R T I F L K Y A S I E K N G E F F M S P N D F V T R Y L N I F S Q P N P K T V E L L S G V V D Q T K D G L I S F Q E F V A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T B
T T T T S
S S
S S S B

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence F E S V L C A P D A L F M V A F Q L F D K A G K G E V T F E D V K Q V F G Q T T I H Q H I P F N W D S E F V Q L H F G K E R K R H L T Y A E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T
S S
S S
B
S S
T T S T T T T
B

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence F T Q F L L E I Q L E H A K Q A F V Q R D N A R T G R V T A I D F R D I M V T I R P H V L T P F V E E C L V A A A G G T T S H Q V S F S Y F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S
G G G
T S T T S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence N G F N S L L N N M E L I R K I Y S T L A G T R K D V E V T K E E F V L A A Q K F G Q V T P M E V D I L F Q L A D L Y E P R G R M T L A D I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
S S
T T
T T
S

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . .

Sequence E R I A P P N P D H V G G Y K L A V A T F A G I E N K F G L Y L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
G G G G G

Download: PDB structure FASTA sequence
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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	K	R	A	D	P	A	E	L	R	T	I	F	L	K	Y	A	S	I	E	K	N	G	E	F	F	M	S	P	N	D	F	V	T	R	Y	L	N	I	F	S	Q	P	N	P	K	T	V	E	L	L	S	G	V	V	D	Q	T	K	D	G	L	I	S	F	Q	E	F	V	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																						T	T				B						T	T	T	T	S																				S	S		S	S	S	B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	F	E	S	V	L	C	A	P	D	A	L	F	M	V	A	F	Q	L	F	D	K	A	G	K	G	E	V	T	F	E	D	V	K	Q	V	F	G	Q	T	T	I	H	Q	H	I	P	F	N	W	D	S	E	F	V	Q	L	H	F	G	K	E	R	K	R	H	L	T	Y	A	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	T	T												S	S		S	S		B												S						S				T	T	S								T	T	T	T				B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	F	T	Q	F	L	L	E	I	Q	L	E	H	A	K	Q	A	F	V	Q	R	D	N	A	R	T	G	R	V	T	A	I	D	F	R	D	I	M	V	T	I	R	P	H	V	L	T	P	F	V	E	E	C	L	V	A	A	A	G	G	T	T	S	H	Q	V	S	F	S	Y	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																						T	T		S	S																G	G	G															T	S	T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	N	G	F	N	S	L	L	N	N	M	E	L	I	R	K	I	Y	S	T	L	A	G	T	R	K	D	V	E	V	T	K	E	E	F	V	L	A	A	Q	K	F	G	Q	V	T	P	M	E	V	D	I	L	F	Q	L	A	D	L	Y	E	P	R	G	R	M	T	L	A	D	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T													T	S		S	S													T	T		T	T																				S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Sequence	E	R	I	A	P	P	N	P	D	H	V	G	G	Y	K	L	A	V	A	T	F	A	G	I	E	N	K	F	G	L	Y	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T			G	G	G	G	G