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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4p56C_

Fold library idPDB HeaderMoleculeTitle
c4p56C_PDB header: solute-binding proteinChain: C: PDB Molecule: putative extracellular solute-binding protein;PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 bordetella bronchiseptica, target efi-510038 (bb2442), with bound3 (r)-mandelate and (s)-mandelate


Added to library: Sat May 10 08:20:09 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PVELTLSSWLPPTHAVVADFLXPWGEEIRKATDGRVTLRLLPKAVTNPAGHFDAVRDGLVDVTFVSHAYY
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Known secondary structure (DSSP)


SS
TTSTTTTTS
SS
SS
TTTTTS
STTSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence PGRFQLTKFAVLPFSGDTATSRSIAAWDTYEKYLLKADEHKGVRLLGIYAHGPGIAFTTSKPVKQIGDFQ
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Known secondary structure (DSSP) TTS
GGGGGGS
TT

S
TGGG
TTTTS


SS



SGGGGT
 .........150.........160.........170.........180.........190.........200.........210
Sequence GLKIRVGGGXAADVAKAVGASPIAKPAPESYELLSTGVADGVFFPAESLVSFKLDSIIRHATEFPGGLYS
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Known secondary structure (DSSP) T

STT


GGGTTS
STTGGGT


TT
S

 .........220.........230.........240.........250.........260.........270.........280
Sequence DTHAVIINRDAFARLSKQDQDTLVRLSGRHLAELAGRAWDTHDAAARKVLEGGEIELVKADDALIEAVRE
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Known secondary structure (DSSP)

TS
TSTSSSS

 .........290.........300.........310.....
Sequence RTKGFEQAWLDAAKAKGIDGPAALASFRAEIKQLD
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Known secondary structure (DSSP) TTTTT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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