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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4p47A_

Fold library idPDB HeaderMoleculeTitle
c4p47A_PDB header: solute-binding proteinChain: A: PDB Molecule: trap dicarboxylate transporter, dctp subunit;PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 ochrobactrum anthropi (oant_4429), target efi-510151, c-termius bound3 in ligand binding pocket


Added to library: Sat Apr 26 08:23:29 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EIRSQTIKFAAANSKGHPQVTGMEKFAELVKEKSGGQINVKLFPGGVLGSDPQTLSGLQGGVVEMTVMNA
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Known secondary structure (DSSP)




SS
TTSTTTS
TTTT

TSS
G
 .........80.........90.........100.........110.........120.........130.........140
Sequence GILSSTVKAFEAVDLPFLFNSGEEADKVMDGPFGTNLMKRLPDTGLIGLAYWELGFRNLTNNRHPVAKLE
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Known secondary structure (DSSP) GGGGGTSGGGGGGGSTT

SSSTTSGGGTSSS


S
 .........150.........160.........170.........180.........190.........200.........210
Sequence DIAGLKIRTLQSPVPVALFNALGANAVPLPYTELYTALETGTVDGQENPNANIINAKFYEVQKYLTLTRH
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Known secondary structure (DSSP) TT



STT



TSS

TTTGGGT

 .........220.........230.........240.........250.........260.........270.........280
Sequence QYNPQIVMISKKFWDRLNDEEKAVIEQAAVEARDYQRKVSREQDATALDEIKKTGMQVTELTPEETTRLR
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Known secondary structure (DSSP) TTS
TT


 .........290.........300.........310.........320
Sequence DAVKPIIDKFTAEIGAETVDELFAELKKVRGENAENLYFQ
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Known secondary structure (DSSP) GGG
S
GGGGS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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