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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4p1eA_

Fold library idPDB HeaderMoleculeTitle
c4p1eA_PDB header: transport proteinChain: A: PDB Molecule: trap dicarboxylate transporter, dctp subunit;PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 escherichia fergusonii (efer_1530), target efi-510119, apo open3 structure, phased with iodide


Added to library: Sat Mar 22 08:21:12 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AESLNVSTSLSPDDPIYKGLQSFKKGVESRTNGEVKIKLFSQLGADNELLQHAQAGSNVGVVVDGARLAQ
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Known secondary structure (DSSP)


S
TTSTTTS




TT
STT
 .........80.........90.........100.........110.........120.........130.........140
Sequence FVPEFAIIPAPFVFKDYTTLKKFISSPVFAQWSEQMSSKSGLTPLSFNWYQGARMLVTQKPVSKPSDLNG
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Known secondary structure (DSSP) TSGGGGGTTSTTS
SSTSS
SS

SSGGGGTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence VRVRALEAPVTIETIKCMGGSPTPLSWSEIYSSIQTGVVDAAEAQPTAVYGSKLYEITKHITKTNHIHLM
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Known secondary structure (DSSP)

SST


GGGTS
SB
TTGGGT






 .........220.........230.........240.........250.........260.........270.........280
Sequence TGIIVSQKWLSSLTAEQQTILREEAQKNGDIASENTILAGDKMLDEMAKKGMTISEVDTQPFIDGCRYVP
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Known secondary structure (DSSP) S
TTT




TT
 .........290......
Sequence EKLGLSEAYKQVNSII
Predicted secondary structure



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Known secondary structure (DSSP) TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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