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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4p16A_

Fold library idPDB HeaderMoleculeTitle
c4p16A_PDB header: hydrolaseChain: A: PDB Molecule: orf1a;PDBTitle: crystal structure of the papain-like protease of middle-east2 respiratory syndrome coronavirus


Added to library: Sat May 10 08:15:03 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QLTIEVLVTVDGVNFRTVVLNNKNTYRSQLGCVFFNGADISDTIPDEKQNGHSLYLADNLTADETKALKE
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Known secondary structure (DSSP)

SSSSS
SSS
T

TT
TTS


GGGTT

SS

 .........80.........90.........100.........110.........120.........130.........140
Sequence LYGPVDPTFLHRFYSLKAAVHGWKMVVCDKVRSLKLSDNNYLNAVIMTLDLLKDIKFVIPALQHAFMKHK
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Known secondary structure (DSSP) T
S

TTTT

TT


TT

TT
TTSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence GGDSTDFIALIMAYGNCTFGAPDDASRLLHTVLAKAELCCSARMVWREWCNVCGIKDVVLQGLKACCYVG
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Known secondary structure (DSSP) TT

T

TT



TTSS

TTTGGGGGS
 .........220.........230.........240.........250.........260.........270.........280
Sequence VQTVEDLRARMTYVCQCGGERHRQLVEHTTPWLLLSGTPNEKLVTTSTAPDFVAFNVFQGVGHYVHARLK
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Known secondary structure (DSSP)

SS

TTSSSTT

S






 .........290.........300.........310....
Sequence GGLILKFDSGTVSKTSDWKCKVTDVLFPGQKYSS
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Known secondary structure (DSSP) TTSSS
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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