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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4p0dA_

Fold library idPDB HeaderMoleculeTitle
c4p0dA_PDB header: structural proteinChain: A: PDB Molecule: trypsin-resistant surface t6 protein;PDBTitle: the t6 backbone pilin of serotype m6 streptococcus pyogenes has a2 modular three-domain structure decorated with variable loops and3 extensions


Added to library: Sat Aug 30 08:18:12 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SLSKDDTAQLKITNIEGGPTVTLYKIGEGVYNGDSFINFKYAEGVSLTETGPTSQEITTIANGINTGKIK
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Known secondary structure (DSSP)


-




S




S
TT



TTS

TSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence PFSTENVSISNGTATYNARGASVYIALLTGATDGRTYNPILLAASYNGEGNLVTKNYLYGQTSVAKSSLP
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Known secondary structure (DSSP)
S

BTTBSS

TT



BTTSTT







B




 .........150.........160.........170.........180.........190.........200.........210
Sequence SITKKVTGTIDDVNKKTTSLGSVLSYSLTFELPSYTKEAVNKTVYVSDNMSEGLTFNFNSLTVEWKGKMA
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Known secondary structure (DSSP) S
TT

TT





TT
S




TTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence NITEDGSVMVENTKIGIAKEVNNGFNLSFIYDSLESISPNISYKAVVNNKAIVGGEGNPNKAEFFYSNNP
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Known secondary structure (DSSP)
TT
TT
SS
GGGGTT



TT


STT


SST
 .........290.........300.........310.........320.........330.........340.........350
Sequence TKGNTYDNLDKKPDKGITSKEDSKIVYTYQIAFRKVDSVSKTPLIGAIFGVYDTSNKLIDIVTTNKNGYA
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Known secondary structure (DSSP) TSS




SSS






B
BTTT

B
SS
TT



TTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence ISTQVSSGKYKIKELKAPKGYSLNTETYEITANWVTATVKTSAKSTTYTSDKNKATDNSEQVGWLKNGIF
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Known secondary structure (DSSP)


B
S

TTB





STTT






S
GGGSGGG



TT
 .........430.........440.........450.........460.........470.
Sequence YSIDSRPTGNDVKEAYIESTKALTDGTTFSKSNEGSGTVLLETDIPNTKLG
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Known secondary structure (DSSP) GGG


SS






TT



TTSS
SS

B


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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