PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4oxqB_

Fold library id	PDB Header	Molecule	Title
c4oxqB_	PDB header: metal binding protein	Chain: B: PDB Molecule: manganese abc transporter, periplasmic-binding protein	PDBTitle: structure of staphylococcus pseudintermedius metal-binding protein2 sita in complex with zinc

Links to external resources
Added to library: Sat Nov 1 08:21:22 2014

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence K L K I V T T N S I L Y D M T K N I T G D K A E I H S I V P V G Q D P H E Y E I K P K D V Q A L T D A D V I I Y N G F N L E S G N G W F E K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T T S S S
T T S
S S S
S
T T T T
G G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A L K Q A N K S I K D D S V I Q A S K N V K P I Y L K K S E H N I D P H A W L S L G N G I E Y V K T I K S A L E N A D K T H A K D Y D K Q G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T S S S T T T T S
B
G G G B
S
G G G S
S T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence T E Y L S K L E K L N K E S K D K F N D I P K E K R V M I T S E G A F K Y F A Q Q F D V K P G Y I W E I N T E N Q G T P E Q M K Q A V D F V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T T T S
G G G
T
S S
S S
S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . .

Sequence K E N H I K N L L L E T S V S D K S M K S L G E E T G A K I Y G T V Y T D S I G K K G S D G D S Y Y K M M E S N I K T I H E S M Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S S
T S
S S S
T T S S
S S T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	L	K	I	V	T	T	N	S	I	L	Y	D	M	T	K	N	I	T	G	D	K	A	E	I	H	S	I	V	P	V	G	Q	D	P	H	E	Y	E	I	K	P	K	D	V	Q	A	L	T	D	A	D	V	I	I	Y	N	G	F	N	L	E	S	G	N	G	W	F	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S												T	T	S						S	S		T	T	S		S	S	S															S							T	T	T	T		G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	L	K	Q	A	N	K	S	I	K	D	D	S	V	I	Q	A	S	K	N	V	K	P	I	Y	L	K	K	S	E	H	N	I	D	P	H	A	W	L	S	L	G	N	G	I	E	Y	V	K	T	I	K	S	A	L	E	N	A	D	K	T	H	A	K	D	Y	D	K	Q	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T			T	T	S	S	S				T	T	T	T	S				B					G	G	G	B		S		G	G	G	S																				S	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	E	Y	L	S	K	L	E	K	L	N	K	E	S	K	D	K	F	N	D	I	P	K	E	K	R	V	M	I	T	S	E	G	A	F	K	Y	F	A	Q	Q	F	D	V	K	P	G	Y	I	W	E	I	N	T	E	N	Q	G	T	P	E	Q	M	K	Q	A	V	D	F	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T	T	T	T	T	S		G	G	G																		T								S	S		S	S			S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Sequence	K	E	N	H	I	K	N	L	L	L	E	T	S	V	S	D	K	S	M	K	S	L	G	E	E	T	G	A	K	I	Y	G	T	V	Y	T	D	S	I	G	K	K	G	S	D	G	D	S	Y	Y	K	M	M	E	S	N	I	K	T	I	H	E	S	M	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T								S	S	S		T											S									S	S	S				T	T	S	S		S	S															T	T