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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4ovrA_

Fold library idPDB HeaderMoleculeTitle
c4ovrA_PDB header: solute-binding proteinChain: A: PDB Molecule: trap dicarboxylate transporter, dctp subunit;PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 xanthobacter autotrophicus py2, target efi-510329, with bound beta-d-3 galacturonate


Added to library: Sat Jan 25 08:20:53 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RQYRSADVQPADYPTVKAVQSXSDELNKETNGKISIKVFPNSQLGSEKDTIEQVKLGALDFIRINSGTLN
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Known secondary structure (DSSP)

SS
TTSTTTS

TTTT

TSSST
 .........80.........90.........100.........110.........120.........130.........140
Sequence TVCPAXTVPVLPFLFRDKAHXRAVLDGPIGDEILADCASHGLVGLAFYDSGARSFYATTPIRKLEDLKGK
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Known secondary structure (DSSP) TT
GGGSTT
SSSSTTGGGT



SS


SGGGGTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence KIRVQQSDIWVSXXKLLGANATPXPAGEVFTGLKSGLIDGAENNWPSYDNFHHYEAAKNYSLSEHSXAPE
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Known secondary structure (DSSP)
SSTT


GGGTS
S
T
GGGT




 .........220.........230.........240.........250.........260.........270.........280
Sequence VLLISKRVFDSFTPEEQVQVRKAAKNSVGYXRQLWDAXEISSREKVEKAGVEVITIDKAPFQAAVQPLYD
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Known secondary structure (DSSP) S
TT




T
 .........290........
Sequence QFVTDPKLKDXITRIKAA
Predicted secondary structure



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Known secondary structure (DSSP)


T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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