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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c4ovqA_

Fold library idPDB HeaderMoleculeTitle
c4ovqA_PDB header: solute-binding proteinChain: A: PDB Molecule: trap dicarboxylate abc transporter, substrate-bindingPDBTitle: crystal structure of a trap periplasmic solute binding protein from2 roseobacter denitrificans, target efi-510230, with bound beta-d-3 glucuronate


Added to library: Sat Jan 25 08:20:47 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DNWRGWNIHVDGYPNTVAXDKFAELLAVKTGGEYTLQXFHGGTLGSQPDAIEQVRAGALEIGNFNLGPIG
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Known secondary structure (DSSP)




TT
TTTSS
TTTT

TS
ST
 .........80.........90.........100.........110.........120.........130.........140
Sequence PLVPAANVVSLPFIFKDVPHXFRVLDGEAGKIIAAGXAEKGIQPLAWYDAGARSFYNGEKPINTPADVEG
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Known secondary structure (DSSP) TT
TTGGGGGSTT
SSSTSTT



SS



SGGGGTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence XKVRVXNNELFTGXIAELGGNPSPXAFAEVYQALKTGVVDGAENNWPSYESTGHFEVAGFYSLSQHLIIP
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Known secondary structure (DSSP)

S
TT


GGGTSSS
TS




 .........220.........230.........240.........250.........260.........270.........280
Sequence ECICINIGTFNALSDEXKTAVLEAAQESALYQRDLWNKREAASRAAVEAAGVVVNEIADKAPFQAAXAPV
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Known secondary structure (DSSP) TS
TT

S

TT
 .........290.........300..
Sequence YEAYFEANPDLRPLVELIQATE
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Known secondary structure (DSSP)
GGGT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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