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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4ovpB_

Fold library idPDB HeaderMoleculeTitle
c4ovpB_PDB header: solute-binding proteinChain: B: PDB Molecule: c4-dicarboxylate transport system substrate-bindingPDBTitle: crystal structure of a trap periplasmic solute binding protein from2 sulfitobacter sp. nas-14.1, target efi-510292, with bound alpha-d-3 manuronate


Added to library: Sat Jan 11 09:23:05 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TVLRGASXFDEEHAFTKTLRKFEELVDEKYDGDVTFDLRLNGELGVESDYVTFLNQGVAIDYTILAPSNX
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Known secondary structure (DSSP)

SS
TTS
SS


TTTT

T
S
S

GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence AKFAPSIPLXDXPFLFRDLDHWNAVLSSDVLAPLEDELLEKADIKIVGYTGGGTRNLLSKQPVVTFDDLK
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Known secondary structure (DSSP) TTT
TTGGGGG
TT

SSSSTT
SS


ST
 .........150.........160.........170.........180.........190.........200.........210
Sequence GHKXRVXGAPIQAQIFQALTAAPSAIAYNEVYNAIQTGVIAGFENEAASIQNLKFYEVAPNLTLTRHSIT
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Known secondary structure (DSSP) T

SSTT


GGGTS
S
TGGGT

 .........220.........230.........240.........250.........260.........270.........280
Sequence VRPIVXSGKTFNSLPADLQAVVLEAGEEAGAYGRELESREDGVKLQEXVDAGQLTVSEFENRDKXLEXVK
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Known secondary structure (DSSP) S
TTS


TT
 .........290.........300..
Sequence PVQDAYAAEIGASDLLEAVRAK
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Known secondary structure (DSSP) TT
T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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