Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4ovdA_

Fold library idPDB HeaderMoleculeTitle
c4ovdA_PDB header: transferaseChain: A: PDB Molecule: peptidoglycan glycosyltransferase;PDBTitle: crystal structure of a putative peptidoglycan glycosyltransferase from2 atopobium parvulum dsm 20469


Added to library: Sat Mar 15 08:46:04 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NDIVLHARRGTIYDRNGNVLAXSVDCKNNTKRVYPYGNVGVQILGFVNADNEGASGLEYYYNDILAGTNG
Predicted secondary structure
































SS confidence





































































Known secondary structure (DSSP)








TT

S





TTTTTT

B
TTS
B
STS
B
 .........80.........90.........100.........110.........120.........130.........140
Sequence HXISNITEAQNGQDIVLSIDIELQKKAEEQLTAAVKDFEAKQGGSIXAXNPRTGEIYAAASYPLPDFVDY
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP)




B



S

T
TT

TTT
BS





G
 .........150.........160.........170.........180.........190.........200.........210
Sequence ESLNLKLVSSIYEPGSVFKVITTSIGVDNNLFGPNSTFNIPTELQVGDNKVTDDDWRTSAXDXSVREXLR
Predicted secondary structure








































SS confidence





































































Known secondary structure (DSSP) GGGS


BB
GGGGTTS

TT

STT
SSS
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence RSSNVGXAFLETQLIGDKRFAEGIDKFGIGHTTGIDFPGEATGIVRSLDQYEGPTGGNXAFGQGLAIPFI
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP) T
TT
TTTTS



SSTT



B


GGG

TTTTT
S
BB
 .........290.........300.........310.........320.........330.........340.........350
Sequence QVIRAYTAVANKGTXVTPHFXVSKGGQEVSWPTKDVISSSTASAELDXXTTVVKEGTGVRAGIYGYTVAG
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP) TTT


BSTT





S
STTGGG

TTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence KTGTGQQVVEETGSYGENSGFVASFCGIVNPSESDLXVYVGLNDTHQLASQSAAVVFSQFAKDAATRLNI
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP)


TTTS


TT

SGGG

S
SS
GGGTSS
 ..
Sequence QP
Predicted secondary structure

SS confidence

Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D