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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4oteA_

Fold library idPDB HeaderMoleculeTitle
c4oteA_PDB header: protein transportChain: A: PDB Molecule: lipoprotein;PDBTitle: crystal structure of a putative lipoprotein (cd630_1653) from2 clostridium difficile 630 at 2.20 a resolution


Added to library: Sat Mar 22 08:16:46 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DKKIVVGATLVPGGELLEELKPLIKEKGYTLEVKNFDDYILPNEALNNGEIDANLFQHEPYLKEAVKAKG
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Known secondary structure (DSSP)

TTTTTT
SSSSTS
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence YKIXAGKKLYVCPAILYSYKIKSVDEFKKGDTIAISNNPSSCSKNLRYLESIGLLTLPKGDGLVSPKDII
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Known secondary structure (DSSP)





SS
SSGGG

TT
S
TTS



SSSS


GGG
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence ENPKGIQFKELDIAQIPSSLPDVTAAFIDTTYAVPAGLDAKKNGIYTAPINDEYANLLAFRTEDKDSEKI
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Known secondary structure (DSSP)

TT


GGGSGGGGGGSS
TTTT





GGG
GGGTT
 .........220.........230.........
Sequence KVLQDVLTSDKARSLIEEKYKGIVIPTFX
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Known secondary structure (DSSP) TSTTSS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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