PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4oteA_

Fold library id	PDB Header	Molecule	Title
c4oteA_	PDB header: protein transport	Chain: A: PDB Molecule: lipoprotein;	PDBTitle: crystal structure of a putative lipoprotein (cd630_1653) from2 clostridium difficile 630 at 2.20 a resolution

Links to external resources
Added to library: Sat Mar 22 08:16:46 2014

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence D K K I V V G A T L V P G G E L L E E L K P L I K E K G Y T L E V K N F D D Y I L P N E A L N N G E I D A N L F Q H E P Y L K E A V K A K G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T T T
S S S S T S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Y K I X A G K K L Y V C P A I L Y S Y K I K S V D E F K K G D T I A I S N N P S S C S K N L R Y L E S I G L L T L P K G D G L V S P K D I I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S G G G
T T
S
T T S
S S S S
G G G
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence E N P K G I Q F K E L D I A Q I P S S L P D V T A A F I D T T Y A V P A G L D A K K N G I Y T A P I N D E Y A N L L A F R T E D K D S E K I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
G G G S G G G G G G S S
T T T T
G G G
G G G T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . .

Sequence K V L Q D V L T S D K A R S L I E E K Y K G I V I P T F X

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S T T S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	K	K	I	V	V	G	A	T	L	V	P	G	G	E	L	L	E	E	L	K	P	L	I	K	E	K	G	Y	T	L	E	V	K	N	F	D	D	Y	I	L	P	N	E	A	L	N	N	G	E	I	D	A	N	L	F	Q	H	E	P	Y	L	K	E	A	V	K	A	K	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	T								T							T	T									S	S	S	S									T	S		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Y	K	I	X	A	G	K	K	L	Y	V	C	P	A	I	L	Y	S	Y	K	I	K	S	V	D	E	F	K	K	G	D	T	I	A	I	S	N	N	P	S	S	C	S	K	N	L	R	Y	L	E	S	I	G	L	L	T	L	P	K	G	D	G	L	V	S	P	K	D	I	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			S	S		S	S	G	G	G			T	T							S															T	T	S					S	S	S	S				G	G	G		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	N	P	K	G	I	Q	F	K	E	L	D	I	A	Q	I	P	S	S	L	P	D	V	T	A	A	F	I	D	T	T	Y	A	V	P	A	G	L	D	A	K	K	N	G	I	Y	T	A	P	I	N	D	E	Y	A	N	L	L	A	F	R	T	E	D	K	D	S	E	K	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T									G	G	G	S	G	G	G	G	G	G	S	S										T	T	T	T															G	G	G								G	G	G	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Sequence	K	V	L	Q	D	V	L	T	S	D	K	A	R	S	L	I	E	E	K	Y	K	G	I	V	I	P	T	F	X
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	S												T	T	S	S