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| Protein Homology/analogY Recognition Engine V 2.2 | |||||||
        
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| Fold library id | PDB Header | Molecule | Title | 
|---|---|---|---|
| c4ot7A_ | PDB header: oxidoreductase | Chain: A: PDB Molecule: nadh:flavin oxidoreductase/nadh oxidase; | PDBTitle: x-structure of a variant of ncr from zymomonas mobilis | 
| Added to library: Sat Feb 21 08:20:08 2015 | |
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| Links to external resources | |
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|   | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | 
| Sequence | M | P | S | L | F | D | P | I | R | F | G | A | F | T | A | K | N | R | I | W | M | A | P | L | T | R | G | R | A | T | R | D | H | V | P | T | E | I | M | A | E | Y | Y | A | Q | R | A | S | A | G | L | I | I | S | E | A | T | G | I | S | Q | E | G | L | G | W | P | Y | A | P | 
| Predicted secondary structure | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ||||||||||||||||||||||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | T | T | S | ![]()  | ![]()  | ![]()  | T | T | ![]()  | ![]()  | ![]()  | S | S | ![]()  | ![]()  | ![]()  | S | T | T | S | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | T | T | T | S | S | ![]()  | ![]()  | ![]()  | ![]()  | S | S | S | S | T | T | T | T | S |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | 
| Sequence | G | I | W | S | D | A | Q | V | E | A | W | L | P | I | T | Q | A | V | H | D | A | G | G | L | I | F | A | Q | L | W | H | M | G | R | M | V | A | L | R | L | D | E | I | P | R | L | L | D | D | Y | E | K | A | A | R | H | A | L | K | A | G | F | D | G | V | Q | I | H | A | A | 
| Predicted secondary structure | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | |||||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | B | S | S | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | T | T | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | G | G | G | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | T | T | S | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | B |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | 
| Sequence | N | G | Y | L | I | D | E | F | I | E | Y | G | G | A | V | E | N | R | I | R | L | L | K | D | V | T | E | R | V | I | A | T | I | G | K | E | R | T | A | V | R | L | S | P | Y | G | V | F | N | G | I | V | Q | V | F | I | P | A | A | K | M | L | S | D | L | D | I | A | F | L | 
| Predicted secondary structure | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ||||||||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | T | T | B | B | S | S | S | S | S | ![]()  | ![]()  | ![]()  | ![]()  | S | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | G | G | G | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | T | T | S | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | T | S | ![]()  | ![]()  |   | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | 
| Sequence | G | M | R | E | G | A | V | D | G | T | F | G | K | T | D | Q | P | K | L | S | P | E | I | R | K | V | F | K | P | P | L | V | L | N | Q | D | Y | T | F | E | T | A | Q | A | A | L | D | S | G | V | A | D | A | I | S | F | G | R | P | F | I | G | N | P | D | L | P | R | R | F | 
| Predicted secondary structure | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | |||||||||||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | ![]()  | ![]()  | ![]()  | S | S | T | T | S | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | S | ![]()  | ![]()  | ![]()  | ![]()  | S | S | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | T | T | S | S | ![]()  | ![]()  | ![]()  | ![]()  | S | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | T | T | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  |   | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | 
| Sequence | F | E | K | A | P | L | T | K | D | V | I | E | T | W | Y | T | Q | T | P | K | G | Y | T | D | Y | P | L | L | ||||||||||||||||||||||||||||||||||||||||||
| Predicted secondary structure | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ![]()  | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | ![]()  | ![]()  | T | G | G | G | S | S | S | S | S | T | T | T | T | S | 
| Download: | PDB structure | FASTA sequence | 
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