Fold library entry viewer: c4oqjA_

Added to library: Sat Mar 22 09:56:15 2014
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	R	D	S	D	I	A	V	I	G	L	A	C	R	F	P	G	A	A	T	P	D	T	F	W	K	V	L	S	E	G	R	E	T	L	T	H	F	S	D	E	E	L	R	A	A	G	V	A	E	P	L	L	A	D	D	R	Y	V	K	A	G	Q	V	L	V	D	A	D	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T											B	T	T	B	S	S										T	T															T	T									T	T						B			T	T	T	T	B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	F	D	A	G	L	F	G	I	T	R	D	E	A	E	L	I	D	P	Q	Q	R	Q	F	L	E	C	A	Y	E	A	L	E	R	A	G	Y	D	P	Q	R	G	E	Q	R	I	G	V	Y	A	G	V	G	L	N	T	Y	L	L	H	N	L	G	E	R	Y	R	T	A	S	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T	T	T									S																			T			T	T	S	S	S																	T	T	T						T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	D	R	Y	R	X	X	I	T	N	D	K	D	F	V	A	T	R	T	A	Y	K	L	N	L	C	G	P	S	V	S	T	N	T	A	C	S	T	S	L	V	A	V	H	L	A	C	L	S	L	L	S	G	D	C	T	X	A	L	A	G	A	A	H	I	Q	A	D	Q	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	T	T											T			S								G	G	G																T	S		S											T	T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	E	G	Y	L	H	H	E	G	X	I	F	S	P	D	G	H	C	R	A	F	D	A	K	A	Q	G	T	V	I	G	N	G	V	G	A	V	V	L	K	R	L	S	D	A	L	A	D	G	D	T	V	H	A	V	I	K	G	T	A	V	N	N	D	G	S	D	K	T	G	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S						T	T	S	S	B		S	S	S				T	T	B	T	T				B		B	B																		T																T	T		S	S	S	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	T	A	P	S	V	Q	G	Q	A	A	V	V	A	E	A	Q	E	I	A	D	V	G	P	E	T	V	S	Y	V	E	A	H	G	T	A	T	P	L	G	D	P	I	E	V	A	A	L	N	Q	A	F	N	R	E	G	A	A	L	A	P	G	S	C	A	L	G	S	V	K	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T																			T			G	G	G												T	T														T	T	T	S	S				T	T							T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	N	V	G	H	L	D	T	A	A	G	X	A	G	L	I	K	T	I	L	X	L	R	H	R	T	L	V	P	S	L	C	F	E	A	P	N	P	E	I	D	F	A	A	G	P	F	Y	V	G	T	E	T	K	E	W	P	A	G	P	T	P	R	R	A	G	V	S	S	F	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				B		G	G	G																T						S	S		S	S	B		T	T	S		G	G	G	S	S														S	S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	I	G	G	T	N	A	H	V	I	V	E	E	P	P	A	V	A	G	P	R	L	L	V	L	S	A	N	T	P	A	A	L	D	T	A	T	A	D	L	A	R	A	L	R	K	D	R	D	L	D	L	S	A	V	A	Q	T	L	A	L	G	R	R	V	L	P	Y	R	R	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S																								S	S																			T	T	S												S	S				S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	L	V	A	T	G	V	R	D	A	A	L	A	L	A	L	G	D	A	G	R	V	X	T	A	G	P	A	D	E	R	P	V	V	E	L	V	T	G	G	G	T	P	E	H	A	A	A	L	Y	E	E	A	A	A	F	R	E	H	F	D	R	C	A	A	E	L	G	T	P	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S											T		T	T	T						T	T	S																																							T	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	A	E	L	L	R	G	H	G	P	D	A	A	F	A	V	Q	Y	A	T	A	R	A	L	A	G	W	G	S	T	A	P	V	V	A	A	D	R	T	E	L	P	D	A	A	L	R	L	L	D	G	I	G	A	Q	H	T	A	G	R	P	G	V	A	L	L	P	A	A	S	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S																		T	T											T	T												T	T		B	S									S	S			T	T	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.
Sequence	P	V	G	T	A	F	L	L	G	L	I	G	R	L	W	T	A	G	D	T	V	D	W	T	V	F	H	Q	G	E	P	V	R	R	V	P	L	P	T	Y	P	F	E	R	V	R	H	W	A	E	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	T										T	T	S																B

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PDB structure

FASTA sequence

Hidden Markov model

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