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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4oojB_

Fold library idPDB HeaderMoleculeTitle
c4oojB_PDB header: unknown functionChain: B: PDB Molecule: sidc, interaptin;PDBTitle: crystal structure of the n-terminal domain of the legionella2 pneumophila protein sidc at 2.4a resolution


Added to library: Sat Mar 1 08:12:58 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VINMVDVIKFKEPERCDYLYVDENNKVHILLPIVGGDEIGLDNTCQTAVELITFFYGSAHSGVTKYSAEH
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Known secondary structure (DSSP)




S


S

TT
TT

BSSBBS

GGGTT
TT

 .........80.........90.........100.........110.........120.........130.........140
Sequence QLSEYKRQLEEDIKAINSQKKISPHAYDDLLKEKIERLQQIEKYIELIQVLKKQYDEQNDIRQLRTGGIP
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Known secondary structure (DSSP) TTTTT
TTTTS
TT
TTSSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence QLPSGVKEIIKSSENAFAVRLSPYDNDKFTRFDDPLFNVKRNISKYDTPSRQAPIPIYEGLGYRLRSTLF
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Known secondary structure (DSSP)



SS


SS

S




S
S



B
GGGSTTSSS
B

S
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence PEDKTPTPINKKSLRDKVKSTVLSHYKDEDRIDGEKKDEKLNELITNLQNELVKELVKSDPQYSKLSLSK
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Known secondary structure (DSSP)
TT







TS
TT



SSSTT
GGGGG


SB
 .........290.........300.........310.........320.........330.........340.........350
Sequence DPRGKEINYDYLVNSLMLVDNDSEIGDWIDTILDATVDSTVWVAQASSPFYDGAKEISSDRDADKISIRV
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Known secondary structure (DSSP)
TTS
B

TTS



TT

S
GGGG


S

TT

S
S
S
 .........360.........370.........380.........390.........400.........410.........420
Sequence QYLLAEANIYCKTNKLSDANFGEFFDKEPHATEIAKRVKEGFTQGADIEPIIYDYINSNHAELGLKSPLT
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Known secondary structure (DSSP) TTS



STTT

TTTGGGT
SS


 .........430.........440.........450.........460.........470.........480.........490
Sequence GKQQQEITDKFTKHYNTIKESPHFDEFFVADPDKKGNIFSHQGRISCHFLDFFTRQTKGKHPLGDLASHQ
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Known secondary structure (DSSP) TT
S

S
TTSSSS
TTTTT
S

GGGTT
 .........500.........510.........520.........530.........540.........550.........560
Sequence EALQEGTSNRLHHKNEVVAQGYEKLDQFKKEVVKLLAENKPKELLDYLVATSPTGVPNYSMLSKETQNYI
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Known secondary structure (DSSP) TSS
SB

SS
TT

B
TTS
BGGGG

 .........570.........580.........590.........600........
Sequence AYNRNWPAIQKELEKATSIPESQKQDLSRLLSRDNLQHDNLSAITWSK
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Known secondary structure (DSSP) TSTT
SS


TTSTT







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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