Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4oo3A_

Fold library idPDB HeaderMoleculeTitle
c4oo3A_PDB header: oxidoreductaseChain: A: PDB Molecule: hypothetical protein;PDBTitle: crystal structure of a hypothetical protein (parmer_00841) from2 parabacteroides merdae atcc 43184 at 2.23 a resolution


Added to library: Sat Mar 8 08:17:19 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EGFTGAPGEVKLITLDPGHFHAALVQKVSYPQVSKDVYVYAPTGFDVDEHLKRIQGFNTRAENPTAWNEI
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP)



S
TT
B
SB
STTSS

TTB
S
SS
SSS



 .........80.........90.........100.........110.........120.........130.........140
Sequence VYTGDDYLEKXLAEKKGNVXIQAGNNGKKTEYIKKTLEAGINVLSDKPXAINSQSFKLLEECFAIAKQKN
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP) STT


S
B
TT

S
S
SSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence IXLYDIXTERNEITTXLQRELSTIPAVYGEQLKGSPEEPAIVKESVHHLFKLVDNKPLTRPVWYLDVNQQ
Predicted secondary structure















































SS confidence





































































Known secondary structure (DSSP)



GGGGST

SB

B
SSSBSS

BSSSSB



GGGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence GEGIVDVTTHLVDLVQWEAFPDQIIDYRKDIELIDANRWTTSISPEEFKQVTGTDAYPDFLKKDVENDTL
Predicted secondary structure










































SS confidence





































































Known secondary structure (DSSP)

GGGTTSTT




SS
S

GGGGGGBSSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence KVYCNGDIVYKIKGVTAKVSVIWNYTFPKGGGDTHFSVXKGSKADLVIRQGKEQNYQPELFVEAVKGVDL
Predicted secondary structure







































SS confidence





































































Known secondary structure (DSSP) TTS


SS


BSSSGGGTTS

TTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence AAYEKDLTASXEKVSAEYPGVALNKVGDGVWQVEIPAKYRVGHEAHFGQVTEHFLDYLKEGKLPDWEVPN
Predicted secondary structure















































SS confidence





































































Known secondary structure (DSSP) STT
TT

GGG


S


TT
 .........430.........
Sequence XLAKYYTTTSALDXAKAKT
Predicted secondary structure

SS confidence


















Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D