Fold library entry viewer: c4om9A_

Added to library: Sat Mar 15 08:46:28 2014
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	D	I	S	K	A	W	A	R	D	Y	L	D	L	A	Q	N	K	G	V	F	Q	P	G	S	T	H	V	K	I	K	L	K	D	F	S	F	P	A	L	P	V	P	D	F	S	S	A	T	A	N	G	A	A	T	S	I	G	G	A	Y	A	V	T	V	A	H	N	A	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T	S										T	T		T	T			T	T			S												S	S						T	T	B		T	T	S	S						T	T						G	G	G	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	K	S	S	A	N	Y	Q	T	Y	G	S	T	Q	Y	T	Q	I	N	R	M	T	T	G	N	D	F	S	I	Q	R	L	N	K	Y	V	V	E	T	R	G	A	D	T	S	F	N	Y	N	E	N	N	Q	N	I	I	D	R	Y	G	V	D	V	G	N	G	K	K	E	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S	S	S	S					T	T												T	T								S	S				S										T	T	S														S	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	G	F	R	V	G	S	G	N	T	T	F	S	G	I	K	T	S	Q	T	Y	Q	A	D	L	L	S	A	S	L	F	H	I	T	N	L	R	A	N	T	V	G	G	N	K	V	E	Y	E	N	D	S	Y	F	T	N	L	T	T	N	G	D	S	G	S	G	V	Y	V	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S				T	T							S		S	T	T																T	T										S	S	S						G	G	G	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	D	N	K	E	D	K	W	V	L	L	G	T	T	H	G	I	I	G	N	G	K	T	Q	K	T	Y	V	T	P	F	D	S	K	T	T	N	E	L	K	Q	L	F	I	Q	N	V	N	I	D	N	N	T	A	T	I	G	G	G	K	I	T	N	K	D	L	V	F	S	G	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T	T													S	S	S	T	T																			T	T							T	T	S						T	T											S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	G	K	I	S	L	K	E	N	L	D	L	G	Y	G	G	F	I	F	D	E	N	K	K	Y	T	V	S	A	E	G	N	N	N	V	T	F	K	G	A	G	I	D	I	G	K	G	S	T	V	D	W	N	I	K	Y	A	S	N	D	A	L	H	K	I	G	E	G	S	L	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S					T	T							S	S								G	G	G							S	S						T	T							S				T	T	S						S	S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	V	I	Q	A	Q	N	T	N	L	K	T	G	N	G	T	V	I	L	G	A	Q	K	T	F	N	N	I	Y	V	A	G	G	P	G	T	V	Q	L	N	A	E	N	A	L	G	E	G	D	Y	A	G	I	F	F	T	E	N	G	G	K	L	D	L	N	G	H	N	Q	T	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S			S	S						S	S						S	T	T		S	S						S	S								S	T	T		S		S	T	T	T	T	T					T	T							T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	K	K	I	A	A	T	D	S	G	T	T	I	T	N	S	N	T	T	K	E	S	V	L	S	V	N	N	Q	N	N	Y	I	Y	H	G	N	V	D	G	N	V	R	L	E	H	H	L	D	T	K	Q	D	N	A	R	L	I	L	D	G	D	I	Q	A	N	S	I	S	I	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S						S	T	T								S	S	S									S	S						S				S	S								S	S			T	T							S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	N	A	P	L	V	M	Q	G	H	A	T	D	H	A	I	F	R	T	T	K	T	N	N	C	P	E	F	L	C	G	V	D	W	V	T	R	I	K	N	A	E	N	S	V	N	Q	K	N	K	T	T	Y	K	S	N	N	Q	V	S	D	L	S	Q	P	D	W	E	T	R	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S														S		S	S	S			S	S		S	T	T	T		S										T								T		G	G	G	S	S	S		S			T	T		S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	F	R	F	D	N	L	N	I	E	D	S	S	L	S	I	A	R	N	A	D	V	E	G	N	I	Q	A	K	N	S	V	I	N	I	G	D	K	T	A	Y	I	D	L	Y	S	G	K	N	I	T	G	A	G	F	T	F	R	Q	D	I	K	S	G	D	S	I	G	E	S	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	S						T	T											S						T		S						T	T	T	T					T	T	T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	F	T	G	G	I	M	A	T	D	G	S	I	S	I	G	D	K	A	I	V	T	L	N	T	V	S	S	L	D	R	T	A	L	T	I	H	K	G	A	N	V	T	A	S	S	S	L	F	T	T	S	N	I	K	S	G	G	D	L	T	L	T	G	A	T	E	S	T	G	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S						S	S						T	T							S						S							T	T							S					S	S					S	S										S	S	S	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	I	T	P	S	M	F	Y	A	A	G	G	Y	E	L	T	E	D	G	A	N	F	T	A	K	N	Q	A	S	V	T	G	D	I	K	S	E	K	A	A	K	L	S	F	G	S	A	D	K	D	N	S	A	T	R	Y	S	Q	F	A	L	A	M	L	D	G	F	D	T	S	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T						S	S							S	S					S						S			B			S	S		S	S	S			S				S		T	T	S	S	T	T	T	S	S	S	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	Q	G	S	I	K	A	A	Q	S	S	L	A	M	N	N	A	L	W	K	V	T	G	N	S	E	L	K	K	L	N	S	T	G	S	M	V	L	F	N	G	G	K	N	I	F	N	T	L	T	V	D	E	L	T	T	S	N	S	A	F	V	M	R	T	N	T	Q	Q	A	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S					T	T				B		S	S			B				S		B			S		B	B		S	S	S			B					T	T					B			S	S	B				S				B		B	B		S	S		B
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	Q	L	I	V	K	N	K	L	E	G	A	N	N	L	L	L	V	D	F	I	E	K	K	G	N	D	K	N	L	N	I	D	L	V	K	A	P	E	N	T	S	K	D	V	F	K	T	E	T	Q	T	I	G	F	S	D	V	T	P	E	I	K	Q	Q	E	K	D	G	K	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S					S	S						B		S				S	S												S	S		S		S		S	S									S	S	S							S			S	T	T
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930
Sequence	V	W	T	L	T	G	Y	K	T	V	N	A	D	Y	K	A	F	L	A	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																S		S

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PDB structure

FASTA sequence

Hidden Markov model

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