Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4ojvA_

Fold library idPDB HeaderMoleculeTitle
c4ojvA_PDB header: hydrolaseChain: A: PDB Molecule: 3',5'-cyclic-nucleotide phosphodiesterase 1;PDBTitle: crystal structure of unliganded yeast pde1


Added to library: Sat Dec 6 08:43:06 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MVVFEITILGANGGPTEYGTQCFILKPARTEDPELIAVDGGAGMYQLREMLVQGDDELVPSFYEHDREPI
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP)



B
SSS
SSBSSS


S
S
SS






SSSSG
 .........80.........90.........100.........110.........120.........130.........140
Sequence EFFIDSKLNIQKGLSKSLLQSLKRQGEHFESANTMKKTYEVFQGITDYYITHPHLDHISGLVVNSPSIYE
Predicted secondary structure








































SS confidence





































































Known secondary structure (DSSP) GGGS
TT

SS
TTTTSS
T
S


GGGTGGGGGS
 .........150.........160.........170.........180.........190.........200.........210
Sequence QENSKKKTIWGLPHTIDVLQKHVFNDLIWPDLTAERSRKLKLKCLNPKEVQKCTIFPWDVIPFKVHHGIG
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP)
SS



TBSSSSB

GGGSTT



TT


SSSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence VKTGAPVYSTFYIFRDRKSKDCIIVCGDVEQDRRESEESLLEEFWSYVAENIPLVHLKGILVECSCPLSS
Predicted secondary structure










































SS confidence





































































Known secondary structure (DSSP) TTT

TTT


S




TTTS

S
GGG

S
SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence KPEQLYGHLSPIYLINELSNLNTLYNSSKGLSGLNVIVTHVKSTPAKRDPRLTILEELRFLAEERNLGDL
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP)
TTS

T
TTTTTT

B


S
SS
TT

S
 .........360...
Sequence RISIALEGHTLFL
Predicted secondary structure





SS confidence












Known secondary structure (DSSP)

TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D