Fold library entry viewer: c4ojpC_

Added to library: Sat Mar 29 08:19:30 2014
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	S	T	G	I	L	T	N	K	Q	A	V	A	R	H	F	G	V	K	Q	S	E	V	V	Y	F	S	V	G	V	D	L	G	G	Y	K	V	I	Y	D	K	E	T	Q	R	A	Y	S	L	P	V	G	I	A	S	G	T	T	A	V	S	L	S	T	A	A	V	L	V	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T			G	G	G						T	T		B		T	T		S					T	T	T	T							S				T	T		B						T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	A	G	S	V	D	L	G	S	L	A	V	S	R	E	E	Y	V	T	L	P	G	S	F	D	S	G	S	T	L	N	V	K	N	E	L	L	T	Y	T	D	G	K	Y	R	W	D	G	I	L	P	K	T	V	A	P	G	S	T	P	A	S	T	G	G	V	G	L	G	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T												T	T						S	S		T	T	T						S	T	T						T	T							S	S	S	S					T	T			T	G	G	G	T		B	S	T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	W	I	S	V	G	D	A	S	L	R	T	Q	L	A	N	G	D	G	S	L	I	G	I	H	P	Q	G	T	L	N	N	V	L	T	V	R	T	P	E	Q	Y	N	A	V	G	D	G	I	A	D	D	T	S	K	L	K	E	M	L	S	D	I	N	N	V	P	E	T	L	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S										T	S		S	T	T	S	B		S	S	S	S	B								B		G	G	G	G	T																									S			S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	D	A	A	A	V	N	S	Y	M	E	Q	V	A	V	K	I	D	L	T	K	L	Y	R	F	T	E	T	L	Y	I	P	P	G	V	S	I	E	I	P	T	S	N	F	F	T	R	E	C	K	Q	G	L	F	Y	D	P	V	D	K	N	T	A	A	I	S	L	M	V	Y	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S							T	T	S	S									S						S						S	S						S	S			S	S		S	S			S							S			S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	K	Q	P	D	G	S	Y	K	L	N	K	D	V	D	Y	Y	P	T	G	L	D	I	D	N	G	D	A	I	T	C	A	R	K	I	D	I	N	N	L	N	L	I	T	A	P	G	V	K	V	G	V	K	W	I	G	G	A	G	C	T	T	K	G	L	S	I	G	E	N	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S								T	T										T	T	S							S					S							T	T		S							S		T	T					S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	G	S	D	I	T	T	A	R	L	P	R	V	G	L	L	Q	S	A	S	W	G	S	I	H	E	N	L	R	I	L	Y	K	T	Q	G	A	V	F	I	D	S	N	G	G	A	A	V	N	N	A	Y	I	S	R	L	G	N	T	N	G	E	L	E	Q	A	V	Y	K	P	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S		G	G	G	S	S	S		S							S		T	T					S						S	S							S			T	T					S						S			T	T	G	G	G				S	S			T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	G	F	T	E	V	G	D	V	A	V	T	Q	F	A	G	S	E	V	K	F	N	S	P	I	I	E	Q	A	S	F	D	F	V	H	A	G	R	D	T	D	S	Y	G	L	F	M	V	D	K	P	H	I	E	S	S	G	G	K	K	K	H	S	F	Y	L	I	N	T	S	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T					S								T	T							S					S		S									T	T	T									S						G	G	G			S							S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	N	V	T	L	S	G	V	G	L	S	G	Q	D	P	D	L	D	S	M	Y	F	L	K	N	C	P	E	T	A	R	N	V	V	R	G	Q	M	P	I	S	G	V	K	L	V	R	G	T	G	N	Y	P	T	L	V	L	D	C	T	N	M	G	S	Q	F	Q	F	G	E	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S						S		T	T	T								S			T	T											S	S									S	S								S		B		T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	G	D	I	F	Y	I	K	D	V	V	G	V	K	A	D	T	L	Y	I	D	P	V	N	G	N	N	Y	N	W	G	T	N	G	T	K	P	I	R	E	L	T	N	I	A	K	I	C	Q	L	F	R	C	K	S	V	Y	L	N	A	G	E	S	V	I	T	S	N	T	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G						S				S						T	T	T			T	T	S		S		B	T	T	B		B			S	T	T									T		S						S	S					S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	P	M	V	V	F	E	G	P	G	S	L	K	A	N	S	G	S	S	F	L	I	K	A	G	G	T	L	S	L	I	G	L	S	G	I	S	T	D	G	G	H	M	F	R	V	S	T	V	E	K	V	N	I	H	T	N	C	S	V	N	A	G	A	A	Y	V	V	L	S	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S				S	S							T	T							S	S							S		S					S	S	S		S							S								S					T	T	S						S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.
Sequence	V	Q	G	N	I	E	Y	R	Q	L	F	Y	S	V	N	C	S	K	Y	I	G	A	T	A	G	Q	T	I	A	G	I	M	V	K	T	A	T	R	P	T	G	I	D	A	A	P	V	D	G	N	V	S	L	T	Y	K	I	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S									S	S					S						S	S	S											S	S	S		G	G	G	S	S	S		B		T	T

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PDB structure

FASTA sequence

Hidden Markov model

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