Fold library entry viewer: c4ogeA_

Added to library: Sat Feb 15 08:23:09 2014
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	H	H	L	R	V	G	I	D	V	G	T	H	S	V	G	L	A	T	L	R	V	D	D	H	G	T	P	I	E	L	L	S	A	L	S	H	I	H	D	L	S	G	I	A	R	R	A	R	R	L	L	H	H	R	R	T	Q	L	Q	Q	L	D	E	V	L	R	D	L	G	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S											T	T																																											T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	I	P	S	M	A	V	R	H	I	A	R	H	R	G	W	R	N	P	Y	S	K	V	E	S	L	L	S	P	A	E	E	S	P	F	M	K	R	K	I	C	A	R	Q	G	V	S	P	D	V	C	K	Q	L	L	R	A	V	F	K	A	D	S	P	R	G	S	A	V	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T	T	T	T	T					S	S					S	S								S	S	S	S				S	S								G	G	G	G	T	T	T			S	S	T	T	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	V	A	P	D	P	L	P	G	Q	G	S	F	R	R	A	P	K	C	D	P	E	F	Q	R	F	R	I	I	S	I	V	A	N	L	R	I	S	E	T	K	G	E	N	R	P	L	T	A	D	E	R	R	H	V	V	T	F	L	T	E	D	S	Q	A	D	L	T	W	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S			B			S	T	T		T	T	S	B				T	T	S														T					S	S	T	T																					T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	D	V	A	E	K	L	G	V	H	R	R	D	L	R	G	T	A	V	H	T	R	S	A	A	R	P	P	I	D	A	T	D	R	I	M	R	Q	T	K	I	S	S	L	K	T	W	W	E	E	A	D	S	E	Q	R	G	A	M	I	R	Y	L	Y	E	D	P	T	D	S	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	S		G	G	G				T	T							S	S														S										T			S												T					S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	C	A	E	I	I	A	E	L	P	E	E	D	Q	A	K	L	D	S	L	H	L	P	A	G	R	A	A	Y	S	R	E	S	L	T	A	L	S	D	H	M	L	A	T	T	D	D	L	H	E	A	R	K	R	L	F	G	V	D	D	S	W	A	P	P	A	E	A	I	N	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T	S	S	T	T	T	T	T					T																									S	S															T	T								T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	P	V	G	N	P	S	V	D	R	T	L	K	I	V	G	R	Y	L	S	A	V	E	S	M	W	G	T	P	E	V	I	H	V	E	H	V	R	D	G	F	T	S	E	R	M	A	D	E	R	D	K	A	N	R	R	R	Y	N	D	N	Q	E	A	M	K	K	I	Q	R	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S																										S								S	S		S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	Y	G	K	E	G	Y	I	S	R	G	D	I	V	R	L	D	A	L	E	L	Q	G	C	A	C	L	Y	C	G	T	T	I	G	Y	H	T	C	Q	L	D	H	I	V	P	Q	A	G	P	G	S	N	N	R	R	G	N	L	V	A	V	C	E	R	C	N	R	S	K	S	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S																T	T	S	B		T	T	T			B			T	T	T						S	S		B	S	S	S	S				S	G	G	G													T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	T	P	F	A	V	W	A	Q	K	C	G	I	P	H	V	G	V	K	E	A	I	G	R	V	R	G	W	R	K	Q	T	S	S	E	D	L	T	R	L	K	K	E	V	I	A	R	L	R	R	T	Q	E	D	P	E	I	D	E	R	S	M	E	S	V	A	W	M	A	N	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S												T	T		S										T																									S		B					T	T	T	T	B
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	L	H	H	R	I	A	A	A	Y	P	E	T	T	V	M	V	Y	R	G	S	I	T	A	A	A	R	K	A	A	G	I	D	S	R	I	N	L	I	G	E	K	G	R	K	D	R	I	D	R	R	H	H	A	V	D	A	S	V	V	A	L	M	E	A	S	V	A	K	T	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	T	T	S							T	T										T		T	T	T	S			S	S					S	S			B	T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	A	E	R	S	S	L	R	G	E	Q	R	L	T	G	K	E	Q	T	W	K	Q	Y	T	G	S	T	V	G	A	R	E	H	F	E	M	W	R	G	H	M	L	H	L	T	E	L	F	N	E	R	L	A	E	D	K	V	Y	V	T	Q	N	I	R	L	R	L	S	D	G	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T					G	G	G				S	S																											T	T		S									S				S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	A	H	T	V	N	P	S	K	L	V	S	H	R	L	G	D	G	L	T	V	Q	Q	I	D	R	A	C	T	P	A	L	W	C	A	L	T	R	E	K	D	F	D	E	K	N	G	L	P	A	R	E	D	R	A	I	R	V	H	G	H	E	I	K	S	S	D	Y	I	Q	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							B							G	G	G		B							T	B	S	S									T	S	T	T		B	T	T	T	B	B				S	S						T	T					T	T	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	F	S	K	R	K	K	T	D	S	D	R	D	E	T	P	F	G	A	I	A	V	R	G	G	F	V	E	I	G	P	S	I	H	H	A	R	I	Y	R	V	E	G	K	K	P	V	Y	A	M	L	R	V	F	T	H	D	L	L	S	Q	R	H	G	D	L	F	S	A	V	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S		T	T	S			T	T					S					T	T						T	T												S	S	S										G	G	G	G	G	G	G	T	T	S		T	T	T	S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	P	P	Q	S	I	S	M	R	C	A	E	P	K	L	R	K	A	I	T	T	G	N	A	T	Y	L	G	W	V	V	V	G	D	E	L	E	I	N	V	D	S	F	T	K	Y	A	I	G	R	F	L	E	D	F	P	N	T	T	R	W	R	I	C	G	Y	D	T	N	S	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S					T	S										T	T										T	T								T	T			S										S	T	T												T	T
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.
Sequence	L	T	L	K	P	I	V	L	A	A	E	G	L	E	N	P	S	S	A	V	N	E	I	V	E	L	K	G	W	R	V	A	I	N	V	L	T	K	V	H	P	T	V	V	R	R	D	A	L	G	R	P	R	Y	S	S	R	S	N	L	P	T	S	W	T	I	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S	B		G	G	G		S	S										T	S	S												T							B		T	T	S		B					T	T

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PDB structure

FASTA sequence

Hidden Markov model

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