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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4ofyD_

Fold library idPDB HeaderMoleculeTitle
c4ofyD_PDB header: cell adhesionChain: D: PDB Molecule: protein syg-2;PDBTitle: crystal structure of the complex of syg-1 d1-d2 and syg-2 d1-d4


Added to library: Sat Feb 22 10:18:29 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence FFLESPSNLSTIAGESITFRCSAEKSPEPIVYSQWKSNTGSLLGYHQEGILPGHQGRFSYIKQNAEELHL
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Known secondary structure (DSSP)

SB




SSS


B



SS




TTS
B




SSB


SSS

SSTTB
 .........80.........90.........100.........110.........120.........130.........140
Sequence KITHVNLDDDGEYECQMLHPEEGPIRAKSFLNIIVPPQLVYFSNYQPNSIIAVKENTPLNITCVVPNVKP
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Known secondary structure (DSSP) SS

TT

TTT


B




TS
TT
TT

BS
 .........150.........160.........170.........180.........190.........200.........210
Sequence EPEVLWYMDGKVMSRDVKQASTPHLNKTFTVYTSLVVQSDRNDHGKVITCEAFQKETDIRITTNTTLDVL
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Known secondary structure (DSSP)

TT

TT


TTS



GGGTT
TTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence FPPSDPTVEILRNPSALRSGDNVTIACSVTGGNPPPDVFWYHENKRLQSHSTLDTRSKEIKNIYSFIASQ
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Known secondary structure (DSSP) B




S

SSSSS


BS

SSSSB



TTTT

S
 .........290.........300.........310.........320.........330.........340.........350
Sequence NDNMAEYECRANNSRPKRKAMKLEVNYPPASVELFGESNIRYGSSANIQCKSLPSNPASQITWIINGRSV
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Known secondary structure (DSSP) TT
SS






B

S
S
STT



BBS

TTB

 .........360.........370.........380.........390.........400.......
Sequence PTPTQREFVVENGIVSSSCVSVHSNELSVEAHQINVECMATNPEGSSAKQHVIKIIA
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Known secondary structure (DSSP)




TT
TTTS
TT

TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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