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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4oenA_

Fold library idPDB HeaderMoleculeTitle
c4oenA_PDB header: transport proteinChain: A: PDB Molecule: second substrate binding domain of putative amino acid abcPDBTitle: crystal structure of the second substrate binding domain of a putative2 amino acid abc transporter from streptococcus pneumoniae canada3 mdr_19a


Added to library: Sat Jan 25 08:43:36 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KYIIASDSSFAPFVFQNSSNQYTGIDMELIKAIAKDQGFEIEITNPGFDAAISAVQAGQADGIIAGMSVT
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Known secondary structure (DSSP)


SSBTTTB
TTS
ST


S
TSSS
SS
B

 .........80.........90.........100.........110.........120.........130.........140
Sequence DARKATFDFSESYYTANTILGVKESSNIASYEDLKGKTVGVKNGTASQTFLTENQSKYGYKIKTFADGSS
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Known secondary structure (DSSP) TT


STT



SSGGGTT
TTST

SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence MYDSLNTGAIDAVMDDEPVLKYSISQGQKLKTPISGTPIGETAFAVKKGANPELIEMFNNGLANLKANGE
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Known secondary structure (DSSP) TSSSTT



S



TTS
TS
 .........220
Sequence FQKILDKYLA
Predicted secondary structure

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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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