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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4oecD_

Fold library idPDB HeaderMoleculeTitle
c4oecD_PDB header: hydrolaseChain: D: PDB Molecule: glycerophosphoryl diester phosphodiesterase;PDBTitle: crystal structure of glycerophosphodiester phosphodiesterase from2 thermococcus kodakarensis kod1


Added to library: Sat Jan 17 08:36:42 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MWERDRVIVLGHRGYMSNYPENTLLAFRKAVEAGADGIELDVWLTKDGRVVVMHDETIDRTSNMKGRQKD
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Known secondary structure (DSSP)



SS
TTTTTTS
TTSTT
S
TTS

SSSBSTTTSSS

BGGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence MTLEELKKADVGQGERIPTLEEVFEAIPRNALVNVELKDRDAAREVAEIVAENNPERVMISSFDIDALRE
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Known secondary structure (DSSP) S
TT


STT



BS
TT
S
GGGTS
GGGS
 .........150.........160.........170.........180.........190.........200.........210
Sequence YRKYDDETTMGLLIDREEVVPLIPKLKDELNLWSVNVPMEAIPLIGLEKTLQALHWVRSLGLKVVLWTEN
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Known secondary structure (DSSP)
SSS


GGGGGGT
STT
TT

ST
 .........220.........230.........240........
Sequence DVLFYKDDNLAKLKGLFEVVIANDVVRMIEYLKKLGLR
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Known secondary structure (DSSP) TGGGTTTS
SSSTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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