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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4obuG_

Fold library idPDB HeaderMoleculeTitle
c4obuG_PDB header: lyaseChain: G: PDB Molecule: pyridoxal-dependent decarboxylase domain protein;PDBTitle: ruminococcus gnavus tryptophan decarboxylase rumgna_01526 (apo)


Added to library: Sat Nov 1 08:30:31 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TEYILNSTQLEEAIKSFVHDFCAEKHEIHDQPVVVEAKEHQEDKIKQIKIPEKGRPVNEVVSEMMNEVYR
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Known secondary structure (DSSP)
TTSS

GGGSTTS
SB



TTTS


SS


TTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence YRGDANHPRFFSFVPGPASSVSWLGDIMTSAYNIHAGGSKLAPMVNCIEQEVLKWLAKQVGFTENPGGVF
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Known secondary structure (DSSP) SSB
TTSTTB

SSS



T
SSSSST

SB
 .........150.........160.........170.........180.........190.........200.........210
Sequence VSGGSMANITALTAARDNKLTDINLHLGTAYISDQTHSSVAKGLRIIGITDSRIRRIPTNSHFQMDTTKL
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Known secondary structure (DSSP) SS

TTTGGGTTS
TT

GGG
B
TTS
B
 .........220.........230.........240.........250.........260.........270.........280
Sequence EEAIETDKKSGYIPFVVIGTAGTTNTGSIDPLTEISALCKKHDMWFHIDGAYGASVLLSPKYKSLLTGTG
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Known secondary structure (DSSP) T
BS
TTT

B

TT

TTGGGGGG
TTTGGGGTTGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence LADSISWDAHKWLFQTYGCAMVLVKDIRNLFHSFHVNPEYLDIGMELTRPARGLKLWLTLQVLGSDLIGS
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Known secondary structure (DSSP) GSSS


S

SBT

SSS



SS
S
T
 .........360.........370.........380.........390.........400.........410.........420
Sequence AIEHGFQLAVWAEEALNPKKDWEIVSPAQMAMINFRYAPKDLTKEEQDILNEKISHRILESGYAAIFTTV
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Known secondary structure (DSSP) SSSTTTT

TTS
TS
B
 .........430.........440.........450.........460..
Sequence LNGKTVLRICAIHPEATQEDMQHTIDLLDQYGREIYTEMKKA
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Known secondary structure (DSSP) TT


TT

T




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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