PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4o9tH_

Fold library id	PDB Header	Molecule	Title
c4o9tH_	PDB header: membrane protein	Chain: H: PDB Molecule: nad(p) transhydrogenase subunit beta;	PDBTitle: mechanism of transhydrogenase coupling proton translocation and2 hydride transfer

Links to external resources
Added to library: Sat Jun 14 08:20:19 2014

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M D L I Q A A Y F V V A I L F I V G L K R M A H P T T A K S G I V W A G W G M V L A V L A T F F W P G M G N F A L I L L A L L L G S V V A W

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T S G G G T T
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence W A A V R V A M T D M P Q M V A I Y N G M G G G A A A T I A A V E L L K G A F E N T G L M A L A I L G G L I G S V A F T G S L I A F A K L Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
G G G T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence G I M K S R P I L F P G Q K A V N A L V L A L T V V I G L S L L W N D A T A S I V L F F L L A L L F G V L M T L P I G G G D M P V A I S F Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T
S
S S T T S
T T
G G G

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260

Sequence N A F T G M A V G F E G F A V G N P A L M V A G T L V G A A G T L L T V L M A R A M N R S V W S V L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T T T
S T T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	D	L	I	Q	A	A	Y	F	V	V	A	I	L	F	I	V	G	L	K	R	M	A	H	P	T	T	A	K	S	G	I	V	W	A	G	W	G	M	V	L	A	V	L	A	T	F	F	W	P	G	M	G	N	F	A	L	I	L	L	A	L	L	L	G	S	V	V	A	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																							T	S	G	G	G																				T	T		T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	W	A	A	V	R	V	A	M	T	D	M	P	Q	M	V	A	I	Y	N	G	M	G	G	G	A	A	A	T	I	A	A	V	E	L	L	K	G	A	F	E	N	T	G	L	M	A	L	A	I	L	G	G	L	I	G	S	V	A	F	T	G	S	L	I	A	F	A	K	L	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	S		G	G	G																											T			S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	I	M	K	S	R	P	I	L	F	P	G	Q	K	A	V	N	A	L	V	L	A	L	T	V	V	I	G	L	S	L	L	W	N	D	A	T	A	S	I	V	L	F	F	L	L	A	L	L	F	G	V	L	M	T	L	P	I	G	G	G	D	M	P	V	A	I	S	F	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	T	T			S					S	S	T																			T	S																							T	T			G	G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Sequence	N	A	F	T	G	M	A	V	G	F	E	G	F	A	V	G	N	P	A	L	M	V	A	G	T	L	V	G	A	A	G	T	L	L	T	V	L	M	A	R	A	M	N	R	S	V	W	S	V	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T																								T	T	T	T			S	T	T	T