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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4o9rA_

Fold library idPDB HeaderMoleculeTitle
c4o9rA_PDB header: signaling proteinChain: A: PDB Molecule: smoothened homolog/soluble cytochrome b562 chimericPDBTitle: human smoothened receptor structure in complex with cyclopamine


Added to library: Sat Mar 8 08:16:37 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QCEVPLVRTDNPKSWYEDVEGCGIQCQNPLFTEAEHQDMHSYIAAFGAVTGLCTLFTLATFVADWRNSNR
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Known secondary structure (DSSP)


TT


GGG

TT
TTBSS
TTS
STTGGGSSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence YPAVILFYVNACFFVGSIGWLAQFMDGARREIVCRADGTMRLGEPTSNETLSCVIIFVIVYYALMAGVVW
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Known secondary structure (DSSP) TTGGGSTTB
TTSBB

SBS
TTS
T
 .........150.........160.........170.........180.........190.........200.........210
Sequence FVVLTYAWHTSFKGKTSYFHLLTWSLPFVLTVAILAVAQVDGDSVSGICFVGYKNYRYRAGFVLAPIGLV
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Known secondary structure (DSSP) TT







T
TTTT
SSST
 .........220.........230.........240.........250.........260.........270.........280
Sequence LIVGGYFLIRGVMTLFSIKSNHADLEDNWETLNDNLKVIEKADNAAQVKDALTKMRAAALDAQKATPPKL
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Known secondary structure (DSSP)

SSS

GGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence EDKSPDSPEMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYIQKYLAASKINETMLRL
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Known secondary structure (DSSP) SSS
TTSTTT
TTTTSS




 .........360.........370.........380.........390.........400.........410.........420
Sequence GIFGFLAFGFVLITFSCHFYDFFNQAEWERSFRDYVLCQANVTIPDCEIKNRPSLLVEKINLFAMFGTGI
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Known secondary structure (DSSP) SS












 .........430.........440.
Sequence AMSTWVWTKATLLIWRRTWCR
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Known secondary structure (DSSP) GGGG
STTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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