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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4o9dA_

Fold library idPDB HeaderMoleculeTitle
c4o9dA_PDB header: gene regulationChain: A: PDB Molecule: rik1-associated factor 1;PDBTitle: structure of dos1 propeller


Added to library: Sat Jan 25 09:32:18 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LMDGESVFFLKPWKHFNETSGDTVCVAYNPLCEKFALGSTAQGNLWIGDFHSETIQSLESHYKLNQVGEK
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Known secondary structure (DSSP)

TT
GGGT



SS

TTSS




TTTT




TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence EYSTISDLCFSKGNLFLYTGAFDNAVKVWDMEGNLCGIFNAPTDYIHKLALSDDDLLAVACKNGYGYLLS
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Known secondary structure (DSSP)


TTSSTTS
TTS



SS

TT

TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence TDNSTGEILTSANLIYPEALEKGYSASLIEFSNFLGRSSDKVIIGYDSFHTSNNRGCLALFDASTASFVQ
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Known secondary structure (DSSP)
TTT



TT

GGGSS

GGGTTTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence KFNTADEAFTSLYMHPSQVGFVASSNTLSNGRVYYLDTRMYKVCLNFTTTQKDINHATISNSGILVTSSG
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Known secondary structure (DSSP)
SS
S

TTSS
SSSTTTTS
S

TTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence TDNQTFVWDSRKPDKPLSLLKHGKTKMIAGINMAQWQPKGNLFVTGGSDGIVKVWDLRLNNPFIQNFTEM
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Known secondary structure (DSSP) TTSTTBTTS
S



S






TTSS

TTS
TTSSS

 .........360.........370.........380.........390.
Sequence NSAITYGGFSEDASKLTVCCVGGDVNMYSLGNKFGEFRIIE
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Known secondary structure (DSSP) SS

TTSSTTT


S
B



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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