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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4o8mA_

Fold library idPDB HeaderMoleculeTitle
c4o8mA_PDB header: transport proteinChain: A: PDB Molecule: trap dicarboxylate transporter, dctp subunit;PDBTitle: crystal structure of a trap periplasmic solute binding protein2 actinobacillus succinogenes 130z, target efi-510004, with bound l-3 galactonate


Added to library: Sat Jan 25 08:18:03 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ETEIMVAYGNQPGEPIDKAMHFWADKVKEKSNGDIVFKLFPSSQLGSETEVLEQAKFGANIITISDYGAL
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Known secondary structure (DSSP)

S

TTSTTTS
TTTT

TT
S

 .........80.........90.........100.........110.........120.........130.........140
Sequence MDIVPDLGVINAPYISQSFEKKSKLLHSDWFKDLSDKLDQHDIHIIVPDVIYGTRHLLTKKPVTKPSDLK
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Known secondary structure (DSSP) TTTSGGGGGGG
TTS
S
TTSTTSS

SSGGGGT
 .........150.........160.........170.........180.........190.........200.........210
Sequence GMKVRVQHSRLFLQTINAMGGVPTPMSLSDVYPGLSEGIIDGLENPTVVLFGGKFFEVAKNLNLTAHTKH
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Known secondary structure (DSSP) T

S
TS

TS
S
TTGGGT

 .........220.........230.........240.........250.........260.........270.........280
Sequence MSPFVAGTAFWNNLTPEQQKIIVDASREMVTYGGGLIEQAENEALENLKKAGVTVNDVDLPAFEASVADV
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Known secondary structure (DSSP) TTS
TT



T
 .........290.........300...
Sequence ISTGFPEWSPNLYKNVQEKLSQF
Predicted secondary structure

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Known secondary structure (DSSP) S
TTS
TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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