PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4o8kB_

Fold library id	PDB Header	Molecule	Title
c4o8kB_	PDB header: transferase	Chain: B: PDB Molecule: type iii pantothenate kinase;	PDBTitle: crystal structure of type iii pantothenate kinase from burkholderia2 thailandensis, apo structure

Links to external resources
Added to library: Sat Jan 18 08:14:48 2014

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G V C L L I D A G N S R I K W A L A D T G R H F V T S G A F E H A D D T P D W S T L P A P R G A W I S N V A G D A A A A R I D A L I D A H W

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S T T
S S S
G G G S
S
S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence P A L P R T V V R A C A A Q C G V T N G Y A E P A R L G S D R W A G L I G A H A A F P G E H L L I A T F G T A T T L E A L R A D G R F T G G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S T T
S S S G G G S
S T T
S S
T T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence L I A P G W A L X X R S L G X A T S L L D E L A A N D A H A P F A I D T P H A L S A G C L Q A Q A G L I E R A W R D L E K A W K A P V R L V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S
T T S
S S T S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . .

Sequence L S G G A A D A I V R A L T V P H T R H D T L V L T G L A L I A H S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S
S

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	V	C	L	L	I	D	A	G	N	S	R	I	K	W	A	L	A	D	T	G	R	H	F	V	T	S	G	A	F	E	H	A	D	D	T	P	D	W	S	T	L	P	A	P	R	G	A	W	I	S	N	V	A	G	D	A	A	A	A	R	I	D	A	L	I	D	A	H	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	S									S	T	T										S	S	S					G	G	G	S				S								S																S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	A	L	P	R	T	V	V	R	A	C	A	A	Q	C	G	V	T	N	G	Y	A	E	P	A	R	L	G	S	D	R	W	A	G	L	I	G	A	H	A	A	F	P	G	E	H	L	L	I	A	T	F	G	T	A	T	T	L	E	A	L	R	A	D	G	R	F	T	G	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T										S			T	T					S	S	S	G	G	G	S															S	T	T									S	S									T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	I	A	P	G	W	A	L	X	X	R	S	L	G	X	A	T	S	L	L	D	E	L	A	A	N	D	A	H	A	P	F	A	I	D	T	P	H	A	L	S	A	G	C	L	Q	A	Q	A	G	L	I	E	R	A	W	R	D	L	E	K	A	W	K	A	P	V	R	L	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T												S		T	T	S				S	S																													T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Sequence	L	S	G	G	A	A	D	A	I	V	R	A	L	T	V	P	H	T	R	H	D	T	L	V	L	T	G	L	A	L	I	A	H	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S											S	S						S