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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4o88A_

Fold library idPDB HeaderMoleculeTitle
c4o88A_PDB header: hydrolaseChain: A: PDB Molecule: n-tagged nuclease;PDBTitle: crystal structure of a c-tagged nuclease


Added to library: Sat Oct 18 10:37:09 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PTTCLNEGAIGYMAIDILQSQNIETITINDNEYKLNKFNNIKDYISKVWGAASVYNLDLGNDYTKWQSSL
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Known secondary structure (DSSP)

STT

SS
B


SSBTT




S
GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence DNVETDNIKNYINGHDNVYYNPGGKNKYLIIEASKELKWKGNLNNNKFNVNLKSIFSNAENLKVGHSDLL
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Known secondary structure (DSSP) TT




SSSS









GGG

GGGG
B
GGGGBTTGGG



 .........150.........160.........170.........180.........190.........200.........210
Sequence KLFSSIVNSKGSDNQKKVLNSLLDNINDRRLKKLVSTGQWTEAISDSVANEIAKNNKLTSIKAQLGSQKT
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Known secondary structure (DSSP)

TTGGGGGB
TT
TTS

 .........220.........230.........240.........250.........260.........270.........280
Sequence QNVMIDANGHDLLKIDYDKTFVTANDLKNKIIDKNKLENAKNYFKIQNNDKILEDIKSKFSKNINENIKG
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Known secondary structure (DSSP) B

S

TTT

S
BT


S
B


STTTB
SS

S
 .........290.........300.........310......
Sequence SIRDHAKLIEFTENKKFNTINDNSNSDSKIKSITCK
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Known secondary structure (DSSP)





B
SS
SS
SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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