PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4o6jA_

Fold library id	PDB Header	Molecule	Title
c4o6jA_	PDB header: metal binding protein	Chain: A: PDB Molecule: iron-dependent transcription repressor related protein;	PDBTitle: crystal sturucture of t. acidophilum ider

Links to external resources
Added to library: Sat May 24 08:28:26 2014

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence R S V T E E D Y L K I I Q E L V L Y K G Y A T L A D I S R S L N V K R Q S V R D E I N H L I S L S M A E K I E R G K Y R L T P S G D R E A N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
B
T
T T S T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R F L R K H R T A E I L L S R C I G I P W E R V D E E A M G I E H G M T E E I I Q R T I E R F G V D R C P H G N P I P D P E G N V E P V A D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T G G G
T
S B
T T S
B
T T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V R I T S L L P D S T A R I S R I V Y E T D D I L H F L A L N G L I P G K D I K I E S V K D T V R V L V D G R S I E I P T D I A M A I M V T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G
T T
S S
T T
T T
S S S T T
T T

. . .

Sequence V D D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	R	S	V	T	E	E	D	Y	L	K	I	I	Q	E	L	V	L	Y	K	G	Y	A	T	L	A	D	I	S	R	S	L	N	V	K	R	Q	S	V	R	D	E	I	N	H	L	I	S	L	S	M	A	E	K	I	E	R	G	K	Y	R	L	T	P	S	G	D	R	E	A	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				S		B										T																T	T	S						T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	F	L	R	K	H	R	T	A	E	I	L	L	S	R	C	I	G	I	P	W	E	R	V	D	E	E	A	M	G	I	E	H	G	M	T	E	E	I	I	Q	R	T	I	E	R	F	G	V	D	R	C	P	H	G	N	P	I	P	D	P	E	G	N	V	E	P	V	A	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																					T	T	T									G	G	G														T		S	B		T	T	S		B				T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	R	I	T	S	L	L	P	D	S	T	A	R	I	S	R	I	V	Y	E	T	D	D	I	L	H	F	L	A	L	N	G	L	I	P	G	K	D	I	K	I	E	S	V	K	D	T	V	R	V	L	V	D	G	R	S	I	E	I	P	T	D	I	A	M	A	I	M	V	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G			T	T									S	S												T	T			T	T									S	S	S						T	T											T	T
	.	.	.
Sequence	V	D	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)