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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4o6cB_

Fold library idPDB HeaderMoleculeTitle
c4o6cB_PDB header: viral proteinChain: B: PDB Molecule: ns1;PDBTitle: west nile virus non-structural protein 1 (ns1) form 2 crystal


Added to library: Sat Feb 22 08:12:15 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ADTGCAIDISRQELRCGSGVFIHNDVEAWMDRYKYYPETPQGLAKIIQKAHKEGVCGLRSVSRLEHQMWE
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Known secondary structure (DSSP)
TTTT





SS
SS

S
TT



SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence AVKDELNTLLKENGVDLSVVVEKQEGMYKSAPKRLTATTEAPELANNTFVVDGPETKECPTQNRAWNSLE
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Known secondary structure (DSSP) TT
S



S
B


SB











SSSS

SSS
GGG
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence VEDFGFGLTSTRMFLKVRESNTTECDSKIIGTAVKNNLAIHSDLSYWIESRLNDTWKLERAVLGEVKSCT
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Known secondary structure (DSSP)

SSS
SS


B

STT
TT
SSSSSSS
B

B
 .........220.........230.........240.........250.........260.........270.........280
Sequence WPETHTLWGDGILESDLIIPVTLAGPRSNHNRRPGYKTQNQGPWDEGRVEIDFDYCPGTTVTLSESCGHR
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Known secondary structure (DSSP)

GGG
TT
SS

GGG
SS
GGGT



TTS

TT



TTSSGGGSSS

TT

SSS


 .........290.........300.........310.........320.........330........
Sequence GPATRTTTESGKLITDWCCRSCTLPPLRYQTDSGCWYGMEIRPQRHDEKTLVQSQVNA
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Known secondary structure (DSSP)
S
BBSB
TT

B

SS

SS
TT
TTSS

STTS
B





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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