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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4o6bA_

Fold library idPDB HeaderMoleculeTitle
c4o6bA_PDB header: viral proteinChain: A: PDB Molecule: non-structural protein 1;PDBTitle: dengue type2 virus non-structural protein 1 (ns1) form 1 crystal


Added to library: Sat Feb 22 08:12:57 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ADSGCVVSKELKCGSGIFITDNVHTWTEQYKFQPESPSKLASAIQKAHEEGICGIRSVTRLENLMWKQIT
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SS
SS




S
T



B

SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence PELNHILSENEVKLTIMTGDIKGIMQAGKRSLRPQHNQTFLIDGPETAECPNTNRAWNSLEVEDYNIWLK
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S


SB







SSS

SSS
GGGSB
S


 .........150.........160.........170.........180.........190.........200.........210
Sequence LKEKQDVFCDSKLMSAAIKDNRAVHADMGYWIESALNDTWKIEKASFIEVKNCHWPKSHTLWSNGVLESE
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SS

SB

TTT
TT
SSSSSS

SB

STT
SS
TT

TTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence MIIPKNLAGPVSQHNYRPGYHTQITGPWHLGKLEMDFDFCDGTTVVVTEDCGNRGPSLRTTTASGKLITE
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Known secondary structure (DSSP)
SS
GGGT


STTS

TT



TTSSGGGSSS

TT

TTS



S
SB
TT

B

 .........290.........300.........310.........
Sequence WCCRSCTLPPLRYRGEDGCWYGMEIRPLKEKEENLVNSL
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Known secondary structure (DSSP) SS

SS

SS

TTSSS
GGGS
B


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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