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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4o5jA_

Fold library idPDB HeaderMoleculeTitle
c4o5jA_PDB header: cell adhesionChain: A: PDB Molecule: uncharacterized protein;PDBTitle: crystal structure of saba from helicobacter pylori


Added to library: Sat Jan 11 09:14:37 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LKNLNEKYEQLSQYLNQVASLKQSIQNANNIELVNSSLNYLKSFTNNNYNSTTQSPIFNAVQAVITSVLG
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Known secondary structure (DSSP)
TT

SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence FWSLYAGNYFTFFVGKKVDSGQPASVQGNPPFKTIIENCSGIENCAMDQTTYDKMKKLAEDLQAAQTNSA
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Known secondary structure (DSSP) STTS
SS





TT


T

SSS


B
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence TKGNNLCALSGCAATSNPPNSTVSNALNLAQQLMDLIANTKTAMMWKNIVISGVSNTSGAITSTNYPTQY
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Known secondary structure (DSSP) T
SB
B

TT









B
S


GGG


TTTTTSTT




GGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence AVFNNIKAMIPILQQAVTLSQSNHTLSASLQAQATGSQTNPKFAKDIYTFAQNQKQVISYAQDIFNLFNS
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Known secondary structure (DSSP) T




TTGGG
T
 .........290.........300.........310.........320.........330.........340.........350
Sequence IPAEQYKYLEKAYLKIPNAGSTPTNPYRQVVNLNQEVQTIKNNVSYYGNRVDAALSVARDVYNLKSNQAE
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Known secondary structure (DSSP) S
TGGG


SSS


S


GGGGG
 .........360.........370
Sequence IVTAYNDAKTLSEEISKLPH
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Known secondary structure (DSSP) TS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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