PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4o29A_

Fold library id	PDB Header	Molecule	Title
c4o29A_	PDB header: transferase	Chain: A: PDB Molecule: protein-l-isoaspartate o-methyltransferase;	PDBTitle: protein-l-isoaspartate o-methyltransferase from pyrobaculum aerophilum2 in complex with s-adenosyl-l-homocysteine

Links to external resources
Added to library: Sat Jan 18 08:34:57 2014

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A L M A K R L V E E L E R D G I V K S E R V K R A L L T V P R E E F V L P E Y R M M A Y E D R P L P L F A G A T I S A P H M V A M M C E L I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T S
S
S T T T S
G G G G T T T T S S S
G G G
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence E P R P G M K I L E V G T G S G Y H A A V C A E A I E K K G R I Y T I E I V K E L A V F A A Q N L E R L G Y W G V V E V Y H G D G K K G L E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T S T T T
S
T
B T T S
T T T
T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . .

Sequence K H A P F D A I I V T A A A D V I P P A L I R Q L K D G G V M V I P V E E R L G Q V L Y K V V K R G D K I E K K A I T Y V M F V P L R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
S B B S S
T T T T T T
B

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	L	M	A	K	R	L	V	E	E	L	E	R	D	G	I	V	K	S	E	R	V	K	R	A	L	L	T	V	P	R	E	E	F	V	L	P	E	Y	R	M	M	A	Y	E	D	R	P	L	P	L	F	A	G	A	T	I	S	A	P	H	M	V	A	M	M	C	E	L	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	S													S		S	T	T	T	S		G	G	G	G	T	T	T	T	S	S	S					G	G	G																T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	P	R	P	G	M	K	I	L	E	V	G	T	G	S	G	Y	H	A	A	V	C	A	E	A	I	E	K	K	G	R	I	Y	T	I	E	I	V	K	E	L	A	V	F	A	A	Q	N	L	E	R	L	G	Y	W	G	V	V	E	V	Y	H	G	D	G	K	K	G	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S									T	T	S										T	T	T									S																T		B	T	T						S		T	T	T			T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Sequence	K	H	A	P	F	D	A	I	I	V	T	A	A	A	D	V	I	P	P	A	L	I	R	Q	L	K	D	G	G	V	M	V	I	P	V	E	E	R	L	G	Q	V	L	Y	K	V	V	K	R	G	D	K	I	E	K	K	A	I	T	Y	V	M	F	V	P	L	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T		S								S	B	B	S	S							T	T														T	T											T	T														B