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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4o1sB_

Fold library idPDB HeaderMoleculeTitle
c4o1sB_PDB header: splicingChain: B: PDB Molecule: v-type atp synthase alpha chain;PDBTitle: crystal structure of tvovma intein


Added to library: Sat Mar 22 08:12:47 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SGGKAVSGETPVYLADGKTIKIKDLYSSERKKEDNIVEAGSGEEIIHLKDPIQIYSYVDGTIVRSRSRLL
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Known secondary structure (DSSP)
TT

TT
BTTS

TTS
SS

SS


TT


 .........80.........90.........100.........110.........120.........130.........140
Sequence YKGKSSYLVRIETIGGRSVSVTPVHKLFVLTEKGIEEVMASNLKVGDMIAAVAESASEATFDRVKSIAYE
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Known secondary structure (DSSP) TTS

TT
TTGGG

TT

TTT

 .........150.........160.........170
Sequence KGDFDVYDLSVPEYGRNFIGGEGLLVLHNA
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SS confidence





























Known secondary structure (DSSP)


SSS
TBTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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