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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4o1rA_

Fold library idPDB HeaderMoleculeTitle
c4o1rA_PDB header: splicingChain: A: PDB Molecule: replicative dna helicase;PDBTitle: crystal structure of npudnab intein


Added to library: Sat Mar 22 08:15:27 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SGGALAGDSLVTLVDSGLQVPIKELVGKSGFAVWALNEATMQLEKAIVSNAFSTGIKPLFTLTTRLGRKI
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Known secondary structure (DSSP)



TT

TTT

GGGGTT

STTTT
TT

 .........80.........90.........100.........110.........120.........130.........140
Sequence RATGNHKFLTINGWKRLDELTPKEHLALPRNSGSDIYWDEIVSITYSGEEEVFDLTVPGLHNFVANNIIV
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Known secondary structure (DSSP)
TT
TTGGG

TT

SSSS

TTTSTT
 ..
Sequence HN
Predicted secondary structure

SS confidence

Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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