Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4nzjA_

Fold library idPDB HeaderMoleculeTitle
c4nzjA_PDB header: hydrolaseChain: A: PDB Molecule: putative alpha-galactosidase;PDBTitle: crystal structure of a putative alpha-galactosidase (bf1418) from2 bacteroides fragilis nctc 9343 at 1.57 a resolution


Added to library: Sat Jan 11 09:01:58 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VVLKVFEGKPRINSPHIIGNYPSTPFIFYIPTSGQRPXQWSAEKLPEGLELDSKTGIISGVXTSKGDYTV
Predicted secondary structure










































SS confidence





































































Known secondary structure (DSSP)



TTSSS

S


TTS

SSSS
S

TTTTTT

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence TLKAENALGVSVKQLVIRIGDELLLTPPXGWNSWNTFGQHLTEELVLQTADAXITNGXRDLGYSYINIDD
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP) TTSS


SS

SGGG

SSTGGGT



T
 .........150.........160.........170.........180.........190.........200.........210
Sequence FWQLPERGADGHLQIDKTKFPRGIKYVADYLHERGFKLGIYSDAAEKTCGGVCGSYGYEETDAKDFASWG
Predicted secondary structure





































SS confidence





































































Known secondary structure (DSSP) TSB
SS

TTSS

B
TTT
TTTT
SSSB
TTSSB

TT
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence VDLLKYDYCNAPVDRVEAXERYAKXGRALRATNRSIVYSVCEWGQREPWKWAKQVGGHLWRVSGDIGDIW
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP)


TTS
S
TSSS

STTTT
GGGTTTTTT
S
SS
B
SSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence YRDGNRVGGLHGILNILEINAPLSEYAGPSGWNDPDXLVVGIDGKSXEGCTQEQYKSHFSLWCXXASPLL
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP)


SS
B
GGGGGG
BTTB


B
TT
TT






TT

 .........360.........370.........380.........390.........400.........410.........420
Sequence SGNDVRNXNDSTLKILLDPDLIAINQDVLGRQAERSIRSDHYDIWVKPLADGRKAVACFNRASSPQTVIL
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP)
S
TTS

T
T
TT




SS
TTS

SSS
 .........430.........440.........450.........460........
Sequence NENTIADLSFEQIYCLDNHLTKSGSDSKELIVKLAPYQCKVYIFGKTD
Predicted secondary structure
























SS confidence















































Known secondary structure (DSSP) TTTSTT


STTTTS
S


TT
S



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D